RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 MOB3BQ86TA1 216 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 THNSL2Q86YJ6 484 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 LYG1Q8N1E2 194 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 OR4A4PQ8NGN8 299 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 CT45A3Q8NHU0 189 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 EDARADDQ8WWZ3 215 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 ACOT12Q8WYK0 555 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 GHITMQ9H3K2 345 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 SCOCQ9UIL1 159 aa12.71□□□□□ -0.37
MRPL55-202ENST00000336300 TRAV18A0A075B6X5 111 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
MRPL55-202ENST00000336300 TSPAN9O75954 239 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 SCTP09683 121 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 MDKP21741 143 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-202ENST00000336300 HES1Q14469 280 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 GNMTQ14749 295 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 UBE2NLQ5JXB2 153 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 FAM53AQ6NSI3 398 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-202ENST00000336300 Q6ZSV7 163 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 TMEM219Q86XT9 240 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 AP3S1Q92572 193 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 ABCG5Q9H222 651 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 DCSTAMPQ9H295 470 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 C16orf95Q9H693 158 aa12.7□□□□□ -0.38
MRPL55-202ENST00000336300 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-202ENST00000336300 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 TIMM23O14925 209 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 SLC31A2O15432 143 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 FABP7O15540 132 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 CD24P25063 80 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 REG1BP48304 166 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 ZNF137PP52743 207 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 RELBQ01201 579 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 CTF1Q16619 201 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 ZNF260Q3ZCT1 412 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 MZT2AQ6P582 158 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 CCBE1Q6UXH8 406 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-202ENST00000336300 C5orf24Q7Z6I8 188 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-202ENST00000336300 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 RAB2BQ8WUD1 216 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-202ENST00000336300 TAF15Q92804 592 aaKnown RBP eCLIP12.69□□□□□ -0.38
MRPL55-202ENST00000336300 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 S1PR3Q99500 378 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 ST6GALNAC5Q9BVH7 336 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 NAA50Q9GZZ1 169 aaKnown RBP12.69□□□□□ -0.38
MRPL55-202ENST00000336300 PIPOXQ9P0Z9 390 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
MRPL55-202ENST00000336300 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 TMEM235A6NFC5 223 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 M0QZK8 103 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 ITGB1BP1O14713 200 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 XRCC3O43542 346 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 DIRAS3O95661 229 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 ARSJQ5FYB0 599 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-202ENST00000336300 C11orf88Q6PI97 169 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 Q6ZPA2 131 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 Q6ZS49 121 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 ST6GALNAC6Q969X2 333 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 CMTM3Q96MX0 182 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 RBM14Q96PK6 669 aaKnown RBP12.68□□□□□ -0.38
MRPL55-202ENST00000336300 BCL7BQ9BQE9 202 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 PRSS22Q9GZN4 317 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
MRPL55-202ENST00000336300 ZNF230Q9UIE0 474 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-202ENST00000336300 FAM90A9PA6NNJ1 464 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 HAX1O00165 279 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 RAB29O14966 203 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 BET1O15155 118 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 LANCL1O43813 399 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 CHST1O43916 411 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 OR2F2O95006 317 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 SNRNP70P08621 437 aaKnown RBP12.67□□□□□ -0.38
MRPL55-202ENST00000336300 CTXN2P0C2S0 81 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 GSTT2BP0CG30 244 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 TMEM11P17152 192 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 CD1BP29016 333 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 SOX6P35712 828 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 TMBIM6P55061 237 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 IZUMO1Q8IYV9 350 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
MRPL55-202ENST00000336300 STAB1Q9NY15 2570 aa12.66□□□□□ -0.38
MRPL55-202ENST00000336300 ST8SIA5O15466 376 aa12.66□□□□□ -0.38
MRPL55-202ENST00000336300 PEX14O75381 377 aa12.66□□□□□ -0.38
MRPL55-202ENST00000336300 IGKV1D-33P01593 117 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms