RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SSR3Q9UNL2 185 aa11.88□□□□□ -0.51
ATG4D-207ENST00000587256 TMEM272A0A1B0GTI8 110 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 M0QZ24 198 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 SLC31A2O15432 143 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 OR2F2O95006 317 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
ATG4D-207ENST00000587256 FAM106CPP0CH98 169 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 VSIG10L2P0DP72 767 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 REG1BP48304 166 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 C2orf76Q3KRA6 126 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 Q6ZTK2 550 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 LINC00311Q8N616 119 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 AK3Q9UIJ7 227 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
ATG4D-207ENST00000587256 NAPSAO96009 420 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 GAPDHP04406 335 aaKnown RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 LPLP06858 475 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 FGF9P31371 208 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 PPP1CCP36873 323 aaKnown RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 BLCAPP62952 87 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 ZNF816Q0VGE8 651 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 GNMTQ14749 295 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 HMGN3Q15651 99 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 FBLN7Q53RD9 439 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 Q8N2B8 174 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 ZNF439Q8NDP4 499 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 IL1F10Q8WWZ1 152 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 CFHR4Q92496 578 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 GALMQ96C23 342 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 ARHGAP5-AS1Q96IT6 56 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 RBM14Q96PK6 669 aaKnown RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 CHCHD6Q9BRQ6 235 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-207ENST00000587256 VCX3AQ9NNX9 186 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 RAB22AQ9UL26 194 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 HSF4Q9ULV5 492 aa11.86□□□□□ -0.51
ATG4D-207ENST00000587256 A0A0B4J203 849 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 IGHV1-3A0A0C4DH29 117 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
ATG4D-207ENST00000587256 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 RGS11O94810 467 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 TNFAIP8O95379 198 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 TMEM11P17152 192 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 MRPS15P82914 257 aaKnown RBP11.85□□□□□ -0.51
ATG4D-207ENST00000587256 PLA2G7Q13093 441 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 TMEM95Q3KNT9 176 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 ABHD14AQ9BUJ0 271 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 PECRQ9BY49 303 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 SERTAD4Q9NUC0 356 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
ATG4D-207ENST00000587256 IGHV3-72A0A0B4J1Y9 119 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 NOTOA8MTQ0 251 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 M0QZK8 103 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 TXNL1O43396 289 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 SLC2A2P11168 524 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-207ENST00000587256 CD36P16671 472 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 GADD45AP24522 165 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 HTD2P86397 168 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 HNF4GQ14541 408 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 CT45A1Q5HYN5 189 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 STEAP3Q658P3 488 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 C5orf24Q7Z6I8 188 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 NR2C2APQ86WQ0 139 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 LYG1Q8N1E2 194 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 CT45A3Q8NHU0 189 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
ATG4D-207ENST00000587256 RAB3CQ96E17 227 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 KCTD7Q96MP8 289 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
ATG4D-207ENST00000587256 MGAT4AQ9UM21 535 aa11.84□□□□□ -0.51
ATG4D-207ENST00000587256 A0A075B6Q4 140 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 A0A087WXM4 84 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 METTL21EPA6NDL7 271 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 SH2D7A6NKC9 451 aaPredicted RBP11.83□□□□□ -0.52
ATG4D-207ENST00000587256 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 CD3GP09693 182 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 RAB6AP20340 208 aa11.83□□□□□ -0.52
ATG4D-207ENST00000587256 ZNF134P52741 427 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms