RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	FCGR2C	P31995	323 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	LOXL3	P58215	753 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	HERV-K104	P61576	105 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	LCN2	P80188	198 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	GNMT	Q14749	295 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	SCGB2B2	Q4G0G5	96 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	PLA1A	Q53H76	456 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	IDO2	Q6ZQW0	420 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	NRARP	Q7Z6K4	114 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR13C8	Q8NGS7	320 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR6F1	Q8NGZ6	308 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	RFESD	Q8TAC1	157 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	MOB3A	Q96BX8	217 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	FXYD6	Q9H0Q3	95 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	GNG12	Q9UBI6	72 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	KPTN	Q9Y664	436 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	SESN1	Q9Y6P5	492 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CR1	P17927	2039 aa		13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ASH1L	Q9NR48	2969 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		A0A087X0M5	115 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		A0A1B0GX30	115 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	hCG_1809904	A0A1W2PP81	198 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		A0A1W2PPE2	198 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		A0A1W2PR64	198 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		A0A1W2PRV1	198 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	RNF223	E7ERA6	249 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ITGB1BP1	O14713	200 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	YPEL1	O60688	119 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	RGS11	O94810	467 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	NDUFB6	O95139	128 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	IGHV1-8	P0DP01	117 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	NFYA	P23511	347 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OMG	P23515	440 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CCR6	P51684	374 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OXA1L	Q15070	435 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	DUSP18	Q8NEJ0	188 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR52L2P	Q8NGH6	319 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	EDARADD	Q8WWZ3	215 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	YPEL2	Q96QA6	119 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	RDH8	Q9NYR8	311 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ONECUT1	Q9UBC0	465 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR2W1	Q9Y3N9	320 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CREBBP	Q92793	2442 aa		13.73	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	IGHV3-43	A0A0B4J1X8	118 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780		B4DSR2	109 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	MSMB	P08118	114 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	IGHV3-43D	P0DP04	118 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	AADAC	P22760	399 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	PPP1CC	P36873	323 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	SURF2	Q15527	256 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	LTC4S	Q16873	150 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	AADACL3	Q5VUY0	350 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	BTNL3	Q6UXE8	466 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	C1orf122	Q6ZSJ8	110 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	C11orf42	Q8N5U0	333 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	WFDC11	Q8NEX6	87 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR10V1	Q8NGI7	309 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	TERB2	Q8NHR7	220 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CHPT1	Q8WUD6	406 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	MRGPRF	Q96AM1	343 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OCEL1	Q9H607	264 aa		13.72	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	YLPM1	P49750	1951 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	FAM172BP	A6NC97	362 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	OR5H14	A6NHG9	310 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	MMP23A	O75900	390 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CD34	P28906	385 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	CEACAM6	P40199	344 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	UCP3	P55916	312 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ERVFRD-1	P60508	538 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	MORN2	Q502X0	79 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ZDHHC22	Q8N966	263 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	ZNF439	Q8NDP4	499 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	C20orf85	Q9H1P6	137 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	METTL8	Q9H825	291 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	UNKL	Q9H9P5	680 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	INSIG2	Q9Y5U4	225 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	NUBP2	Q9Y5Y2	271 aa		13.71	□□□□□ -0.21
CDK5RAP3-215	ENST00000579780	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	5e-7	■■□□□ 13.4
CDK5RAP3-215	ENST00000579780	BAHCC1	Q9P281	2608 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TRAV20	A0A0B4J274	112 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TCRB	P04435	133 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	NFYB	P25208	207 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	DVL1P1	P54792	670 aa	Predicted RBP	13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TRIM16L	Q309B1	348 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780		Q8N7P7	452 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	C8orf31	Q8N9H6	132 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	LINC01356	Q8N9X3	169 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	OR2AK2	Q8NG84	335 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	CREB3L1	Q96BA8	519 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	SCGB3A2	Q96PL1	93 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TMPRSS13	Q9BYE2	586 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	PARP12	Q9H0J9	701 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	SIRPD	Q9H106	197 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TMEM133	Q9H2Q1	129 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	MMP26	Q9NRE1	261 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	CCDC168	Q8NDH2	2452 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	ARHGAP32	A7KAX9	2087 aa		13.7	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	AKAP9	Q99996	3911 aa		13.7	□□□□□ -0.22

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