RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SGPP2Q8IWX5 399 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 STX19Q8N4C7 294 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 OR1L1Q8NH94 360 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 MRPL48Q96GC5 212 aaKnown RBP9.47□□□□□ -0.89
SNX6-209ENST00000557265 ALG8Q9BVK2 526 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 IL36GQ9NZH8 169 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 TRAPPC2LQ9UL33 140 aa9.47□□□□□ -0.89
SNX6-209ENST00000557265 EXOGQ9Y2C4 368 aaKnown RBP9.47□□□□□ -0.89
SNX6-209ENST00000557265 MRPS28Q9Y2Q9 187 aaKnown RBP9.47□□□□□ -0.89
SNX6-209ENST00000557265 A0A1W2PN81 502 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 A8MZ25 164 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 NBR2O15453 112 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 JTBO76095 146 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 HBZP02008 142 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 SERPINA2P20848 420 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 CHRNA7P36544 502 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 PITPNAQ00169 270 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 MPV17LQ2QL34 196 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 SLC25A30Q5SVS4 291 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 STEAP3Q658P3 488 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 LINC00596Q86U02 117 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 LYPD6Q86Y78 171 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 SYS1Q8N2H4 156 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 LGALS12Q96DT0 336 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 S100A13Q99584 98 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 SPATA25Q9BR10 227 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 FBXO7Q9Y3I1 522 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 AP4S1Q9Y587 144 aa9.46□□□□□ -0.9
SNX6-209ENST00000557265 A0A1W2PP11 408 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 HSPA12AO43301 675 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 IGHV3-11P01762 117 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 HSPB1P04792 205 aaKnown RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 ZNF93P35789 620 aaPredicted RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 NDPQ00604 133 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 TMEM30BQ3MIR4 351 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 MEDAGQ5VYS4 303 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 OR4K15Q8NH41 348 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 FLYWCH2Q96CP2 140 aaKnown RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 SLC7A6OSQ96CW6 309 aaPredicted RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 MYCBPQ99417 103 aaPredicted RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 RSRP1Q9BUV0 290 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 JAM3Q9BX67 310 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 MRPL20Q9BYC9 149 aaKnown RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 RAB9BQ9NP90 201 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 PAK1IP1Q9NWT1 392 aaPredicted RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 ETAA1Q9NY74 926 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 KIAA1456Q9P272 454 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 AASSQ9UDR5 926 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 OAZ3Q9UMX2 235 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 FOXA2Q9Y261 457 aaPredicted RBP9.45□□□□□ -0.9
SNX6-209ENST00000557265 A3GALT2U3KPV4 340 aa9.45□□□□□ -0.9
SNX6-209ENST00000557265 SAC3D1A6NKF1 404 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 MCRIP1C9JLW8 97 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 IGLV1-51P01701 117 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 IFNA6P05013 189 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 GTF2F2P13984 249 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 ARSBP15848 533 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 RCC1P18754 421 aaPredicted RBP9.44□□□□□ -0.9
SNX6-209ENST00000557265 CX3CL1P78423 397 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 ADARB1P78563 741 aaKnown RBP9.44□□□□□ -0.9
SNX6-209ENST00000557265 MRPL28Q13084 256 aaKnown RBP9.44□□□□□ -0.9
SNX6-209ENST00000557265 HAGHQ16775 308 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 SLC22A6Q4U2R8 563 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 MORN2Q502X0 79 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 C6orf183Q5T699 404 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 DDI2Q5TDH0 399 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 ANKRD13BQ86YJ7 626 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 NPBQ8NG41 125 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 RGP1Q92546 391 aaPredicted RBP9.44□□□□□ -0.9
SNX6-209ENST00000557265 NABP2Q9BQ15 211 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 ELOVL1Q9BW60 279 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 CST11Q9H112 138 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 TMEM138Q9NPI0 162 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 OR2S2Q9NQN1 319 aa9.44□□□□□ -0.9
SNX6-209ENST00000557265 SNTNA6NMZ2 147 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 ZNF780AO75290 641 aaPredicted RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 CD2P06729 351 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 FCGR1AP12314 374 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 PPP1CCP36873 323 aaKnown RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 OR3A3P47888 321 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 GTF2A1P52655 376 aaPredicted RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 GBX2P52951 348 aaPredicted RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 PPP3R1P63098 170 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 GNMTQ14749 295 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 LRRC36Q1X8D7 754 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 ZNF660Q6AZW8 331 aaPredicted RBP9.43□□□□□ -0.9
SNX6-209ENST00000557265 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 TCTEX1D1Q8N7M0 179 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 GPR148Q8TDV2 347 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 ABHD5Q8WTS1 349 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 TMEM106AQ96A25 262 aa9.43□□□□□ -0.9
SNX6-209ENST00000557265 CENPNQ96H22 339 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms