RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 TMEM106AQ96A25 262 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 CYYR1Q96J86 154 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 CST11Q9H112 138 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 GNG12Q9UBI6 72 aa9.77□□□□□ -0.85
VPS29-211ENST00000553128 WARS2Q9UGM6 360 aaKnown RBP9.77□□□□□ -0.85
VPS29-211ENST00000553128 GEMIN2O14893 280 aaKnown RBP9.76□□□□□ -0.85
VPS29-211ENST00000553128 OR7C1O76099 320 aaPredicted RBP9.76□□□□□ -0.85
VPS29-211ENST00000553128 HTR3BO95264 441 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ADARB1P78563 741 aaKnown RBP9.76□□□□□ -0.85
VPS29-211ENST00000553128 DEFA5Q01523 94 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 GNMTQ14749 295 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ACTBL2Q562R1 376 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ZNF660Q6AZW8 331 aaPredicted RBP9.76□□□□□ -0.85
VPS29-211ENST00000553128 LCN12Q6JVE5 192 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 CD200R1LQ6Q8B3 271 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 UNQ5815/PRO19632Q6UWF5 114 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 FAM220AQ7Z4H9 259 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 Q8N402 240 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 LFNGQ8NES3 379 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ABHD5Q8WTS1 349 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 LRGUKQ96M69 825 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 NEURL2Q9BR09 285 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 FAM107BQ9H098 131 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ST3GAL6Q9Y274 331 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 ERGIC3Q9Y282 383 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
VPS29-211ENST00000553128 OR4C45A6NMZ5 311 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 ZAR1LA6NP61 321 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 AIPO00170 330 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 ARPC1BO15143 372 aaKnown RBP9.75□□□□□ -0.85
VPS29-211ENST00000553128 SULT1B1O43704 296 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 CDRT1O95170 752 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 HBZP02008 142 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 TRGV3P03979 118 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 ZP3P21754 424 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 OR3A3P47888 321 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 MECP2P51608 486 aaKnown RBP9.75□□□□□ -0.85
VPS29-211ENST00000553128 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 RSU1Q15404 277 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 PYHIN1Q6K0P9 492 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 FDX2Q6P4F2 183 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 ZNF497Q6ZNH5 498 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 OR51A2Q8NGJ7 313 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 RGP1Q92546 391 aaPredicted RBP9.75□□□□□ -0.85
VPS29-211ENST00000553128 CCDC124Q96CT7 223 aaKnown RBP9.75□□□□□ -0.85
VPS29-211ENST00000553128 RDH12Q96NR8 316 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 FAM192AQ9GZU8 254 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 IFT22Q9H7X7 185 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 RANGRFQ9HD47 186 aaPredicted RBP9.75□□□□□ -0.85
VPS29-211ENST00000553128 NDE1Q9NXR1 346 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 ETAA1Q9NY74 926 aa9.75□□□□□ -0.85
VPS29-211ENST00000553128 NUPR2A6NF83 97 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 SNX3O60493 162 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 TPPPO94811 219 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 CNIH1O95406 144 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 CSTBP04080 98 aaKnown RBP9.74□□□□□ -0.85
VPS29-211ENST00000553128 RBM11P57052 281 aaKnown RBP9.74□□□□□ -0.85
VPS29-211ENST00000553128 ATAD3CQ5T2N8 411 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 SYT6Q5T7P8 510 aaPredicted RBP9.74□□□□□ -0.85
VPS29-211ENST00000553128 CEMP1Q6PRD7 247 aaPredicted RBP9.74□□□□□ -0.85
VPS29-211ENST00000553128 ASCL4Q6XD76 172 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 OR4K15Q8NH41 348 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 CLCC1Q96S66 551 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 OVOL2Q9BRP0 275 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 PRRG3Q9BZD7 231 aa9.74□□□□□ -0.85
VPS29-211ENST00000553128 A0A1W2PP11 408 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 ZNF785A8K8V0 405 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 B2RBV5 119 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 RRHO14718 337 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 SPINT2O43291 252 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 HTR1AP08908 422 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 RCC1P18754 421 aaPredicted RBP9.73□□□□□ -0.85
VPS29-211ENST00000553128 ATP6V1E1P36543 226 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 ALDH3A2P51648 485 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 CCR9P51686 369 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 MNAT1P51948 309 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 TMEM267Q0VDI3 215 aaPredicted RBP9.73□□□□□ -0.85
VPS29-211ENST00000553128 ALKBH1Q13686 389 aaKnown RBP9.73□□□□□ -0.85
VPS29-211ENST00000553128 MORN2Q502X0 79 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 AKIRIN2Q53H80 203 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 FAM131AQ6UXB0 335 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 PARP16Q8N5Y8 322 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 OR52L2PQ8NGH6 319 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 NEK7Q8TDX7 302 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 ASB9Q96DX5 294 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 PELI1Q96FA3 418 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 GPER1Q99527 375 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 ABHD14AQ9BUJ0 271 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 SLA2Q9H6Q3 261 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 SIGLEC8Q9NYZ4 499 aa9.73□□□□□ -0.85
VPS29-211ENST00000553128 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 PPP1CCP36873 323 aaKnown RBP9.72□□□□□ -0.85
VPS29-211ENST00000553128 PLGLAQ15195 96 aa9.72□□□□□ -0.85
VPS29-211ENST00000553128 CD300EQ496F6 205 aaPredicted RBP9.72□□□□□ -0.85
VPS29-211ENST00000553128 NHLRC3Q5JS37 347 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms