RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 ID4P47928 161 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 FAM53AQ6NSI3 398 aaPredicted RBP10.94□□□□□ -0.66
SEC13-216ENST00000479868 ASCL5Q7RTU5 278 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 OR8U1Q8NH10 309 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 LRRC46Q96FV0 321 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 RBM7Q9Y580 266 aaKnown RBP10.94□□□□□ -0.66
SEC13-216ENST00000479868 DIDO1Q9BTC0 2240 aaKnown RBP10.94□□□□□ -0.66
SEC13-216ENST00000479868 A0A1B0GWJ7 208 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 TMEM30CPA0ZSE6 113 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 IGSF23A1L1A6 192 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 M0R1B8 84 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 TMEM50AO95807 157 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 IGKV1-39P01597 117 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
SEC13-216ENST00000479868 IGKV1D-39P04432 117 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 SERPINE2P07093 398 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 CAV2P51636 162 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 DEFA5Q01523 94 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 ID3Q02535 119 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 OR1L1Q8NH94 360 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 COQ2Q96H96 371 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 DCAF16Q9NXF7 216 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 GLS2Q9UI32 602 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 DUSP13Q9UII6 198 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 KCNS2Q9ULS6 477 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 CUL9Q8IWT3 2517 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 BORCS7-ASMTA0A0B4J1R7 106 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 EPHA1P21709 976 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 TIMP3P35625 211 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 OR3A1P47881 315 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 PJVKQ0ZLH3 352 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 LILRB2Q8N423 598 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 OR2Z1Q8NG97 314 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 GINS3Q9BRX5 216 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 LYRM2Q9NU23 88 aaPredicted RBP10.93□□□□□ -0.66
SEC13-216ENST00000479868 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
SEC13-216ENST00000479868 NUDT19A8MXV4 375 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 PVALBP20472 110 aaPredicted RBP10.92□□□□□ -0.66
SEC13-216ENST00000479868 OMGP23515 440 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 COL10A1Q03692 680 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 BTNL8Q6UX41 500 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 Q6ZRG5 221 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 ODF3L1Q8IXM7 274 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 ICE1Q9Y2F5 2266 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
SEC13-216ENST00000479868 WNT2P09544 360 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 SPP1P10451 314 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 GABRA2P47869 451 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 CLINT1Q14677 625 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 EIF2S3LQ2VIR3 472 aaKnown RBP10.92□□□□□ -0.66
SEC13-216ENST00000479868 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 SLC35E4Q6ICL7 350 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 Q6ZRM9 215 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 ZGRF1Q86YA3 2104 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 C1orf174Q8IYL3 243 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 DRAM1Q8N682 238 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 TMEM252Q8N6L7 170 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 HSD17B11Q8NBQ5 300 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 PRR7Q8TB68 274 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 LRRC29Q8WV35 223 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 ABHD14BQ96IU4 210 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 AKR1E2Q96JD6 320 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 ESRP2Q9H6T0 727 aaKnown RBP10.92□□□□□ -0.66
SEC13-216ENST00000479868 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 FAM96BQ9Y3D0 163 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 RNF115Q9Y4L5 304 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 USF3Q68DE3 2245 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 PLCE1Q9P212 2302 aa10.92□□□□□ -0.66
SEC13-216ENST00000479868 MEX3AA1L020 520 aaKnown RBP10.91□□□□□ -0.66
SEC13-216ENST00000479868 CHST1O43916 411 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 PITX3O75364 302 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 ATG12O94817 140 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 SEC11BP0C7V7 166 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 GLIPR1P48060 266 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 BLOC1S1P78537 153 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 ZNF585BQ52M93 769 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 SPRNQ5BIV9 151 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 C22orf34Q6ZV56 151 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 OR52L2PQ8NGH6 319 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 FAM57AQ8TBR7 257 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 MRGPRDQ8TDS7 321 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 TMEM171Q8WVE6 324 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 GALMQ96C23 342 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 ABHD17AQ96GS6 310 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 FAM212BQ9NTI7 297 aaPredicted RBP10.91□□□□□ -0.66
SEC13-216ENST00000479868 OOEPA6NGQ2 149 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 AGPAT2O15120 278 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 HBZP02008 142 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 MUC1P15941 1255 aaPredicted RBP10.91□□□□□ -0.66
SEC13-216ENST00000479868 EGR1P18146 543 aa10.91□□□□□ -0.66
SEC13-216ENST00000479868 CEACAM8P31997 349 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms