RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 FOXO1Q12778 655 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 TMEM187Q14656 261 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 ZNF429Q86V71 674 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 LRRC29Q8WV35 223 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 ABHD17AQ96GS6 310 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 M0R1X1 148 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 SOX15O60248 233 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 CRYBA1P05813 215 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 NQO2P16083 231 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 F2RP25116 425 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 CEBPDP49716 269 aaPredicted RBP9.99□□□□□ -0.81
NPHP4-204ENST00000460696 MOB1BQ7L9L4 216 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 LDLRAD3Q86YD5 345 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 RAB9BQ9NP90 201 aa9.99□□□□□ -0.81
NPHP4-204ENST00000460696 IGKV1-12A0A0C4DH73 117 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 LRRC3CA6NJW4 275 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 C17orf112F2Z3M2 114 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 EIF3GO75821 320 aaKnown RBP eCLIP9.98□□□□□ -0.81
NPHP4-204ENST00000460696 IGKV1D-12P01611 117 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 SUPT4H1P63272 117 aaKnown RBP9.98□□□□□ -0.81
NPHP4-204ENST00000460696 RPL19P84098 196 aaKnown RBP9.98□□□□□ -0.81
NPHP4-204ENST00000460696 HPSE2Q8WWQ2 592 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 TREM2Q9NZC2 230 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 ATPIF1Q9UII2 106 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 FOXD3Q9UJU5 478 aaPredicted RBP9.98□□□□□ -0.81
NPHP4-204ENST00000460696 GAB2Q9UQC2 676 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 A0A1W2PPH5 198 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 G3V3Q6 166 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 FCGR3BO75015 233 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 CA11O75493 328 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 HAND1O96004 215 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 OR8U8P0C7N1 319 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 RAB13P51153 203 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 UCNP55089 124 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 ZNF818PQ6ZRF7 136 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 PKD1L2Q7Z442 2459 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 BMPERQ8N8U9 685 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 FDCSPQ8NFU4 85 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 OR4F5Q8NH21 305 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 DLL3Q9NYJ7 618 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 hCG_1809904A0A1W2PP81 198 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 A0A1W2PR64 198 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 A0A1W2PRV1 198 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 RBFOX3A6NFN3 312 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 GAPDHP04406 335 aaKnown RBP9.98□□□□□ -0.81
NPHP4-204ENST00000460696 HLA-GP17693 338 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 SLC38A11Q08AI6 406 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 IGFBP7Q16270 282 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 ZNF561Q8N587 486 aa9.98□□□□□ -0.81
NPHP4-204ENST00000460696 LY6G6EA0A0G2JKS1 128 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 SCAF4O95104 1147 aaKnown RBP9.97□□□□□ -0.81
NPHP4-204ENST00000460696 RAB4BP61018 213 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 USF2Q15853 346 aaPredicted RBP9.97□□□□□ -0.81
NPHP4-204ENST00000460696 C5orf24Q7Z6I8 188 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 GGNQ86UU5 652 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 OR4A4PQ8NGN8 299 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 U3KQA8 63 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 ABCA1O95477 2261 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 IGKV1-27A0A075B6S5 117 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 A0A1W2PPE2 198 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 RHBDL1O75783 438 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 KITLGP21583 273 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 FGF7P21781 194 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 Q0VFX4 171 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 IL24Q13007 206 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 NSUN5P2Q63ZY6 315 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 EDARADDQ8WWZ3 215 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 MARS2Q96GW9 593 aaKnown RBP9.97□□□□□ -0.81
NPHP4-204ENST00000460696 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 Q9N2K0 584 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 OR5H1A6NKK0 313 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 CYB5BO43169 146 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 CRYGSP22914 178 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 MALSU1Q96EH3 234 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 MTCH1Q9NZJ7 389 aa9.97□□□□□ -0.81
NPHP4-204ENST00000460696 MT-ND4LP03901 98 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 SPP1P10451 314 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 PPP1CCP36873 323 aaKnown RBP9.96□□□□□ -0.81
NPHP4-204ENST00000460696 MDH2P40926 338 aaKnown RBP9.96□□□□□ -0.81
NPHP4-204ENST00000460696 UBE2G2P60604 165 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 ZNF610Q8N9Z0 462 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 UBAC2Q8NBM4 344 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 S1PR3Q99500 378 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 SLC25A22Q9H936 323 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 OR1A1Q9P1Q5 309 aa9.96□□□□□ -0.81
NPHP4-204ENST00000460696 CDK2AP1O14519 115 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 OR2H2O95918 312 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 MT-CO2P00403 227 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 PLA2G5P39877 138 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 S100A12P80511 92 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 HIST3H3Q16695 136 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 NANPQ8TBE9 248 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 TVP23CQ96ET8 276 aa9.96□□□□□ -0.82
NPHP4-204ENST00000460696 TCEAL7Q9BRU2 100 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms