RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 NAA60Q9H7X0 242 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 ARID1AO14497 2285 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 HOXB5P09067 269 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 EDDM3AQ14507 147 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 PXDC1Q5TGL8 231 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 SLC35E4Q6ICL7 350 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 H1FOOQ8IZA3 346 aaPredicted RBP17.66■□□□□ 0.42
PTPRF-207ENST00000436724 DEFB108BQ8NET1 73 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 MS4A7Q9GZW8 240 aaPredicted RBP17.66■□□□□ 0.42
PTPRF-207ENST00000436724 PARP12Q9H0J9 701 aaKnown RBP17.66■□□□□ 0.42
PTPRF-207ENST00000436724 CCL28Q9NRJ3 127 aa17.66■□□□□ 0.42
PTPRF-207ENST00000436724 TFF3Q07654 80 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 HMGN3Q15651 99 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 FAM53AQ6NSI3 398 aaPredicted RBP17.65■□□□□ 0.42
PTPRF-207ENST00000436724 MRGPRDQ8TDS7 321 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 DCTN5Q9BTE1 182 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 NMES1Q9C002 83 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 SLC5A7Q9GZV3 580 aa17.65■□□□□ 0.42
PTPRF-207ENST00000436724 METTL8Q9H825 291 aaKnown RBP17.65■□□□□ 0.42
PTPRF-207ENST00000436724 A0A0B4J2A0 478 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 C12orf77C9JDV5 145 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 HSD17B6O14756 317 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 SELLP14151 372 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 GNLYP22749 145 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 FAM90A1Q86YD7 464 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 FAM219AQ8IW50 185 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 ZNF565Q8N9K5 539 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 INO80EQ8NBZ0 244 aaPredicted RBP17.64■□□□□ 0.42
PTPRF-207ENST00000436724 OR1L1Q8NH94 360 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 PHYHIPLQ96FC7 376 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 SHPKQ9UHJ6 478 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 OR2W1Q9Y3N9 320 aa17.64■□□□□ 0.42
PTPRF-207ENST00000436724 A0A1B0GW55 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 HSPA12AO43301 675 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L2P0CJ85 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L3P0CJ86 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L4P0CJ87 422 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L5P0CJ88 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L6P0CJ89 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L7P0CJ90 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 CACNA1BQ00975 2339 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 BTN1A1Q13410 526 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4L9Q6RFH8 374 aaPredicted RBP17.64■□□□□ 0.41
PTPRF-207ENST00000436724 OR13A1Q8NGR1 328 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 OR10C1Q96KK4 312 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DNTTIP1Q9H147 329 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 RAB18Q9NP72 206 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 DUX4Q9UBX2 424 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 ARFGEF3Q5TH69 2177 aa17.64■□□□□ 0.41
PTPRF-207ENST00000436724 VSTM5A8MXK1 200 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 H0YIZ8 118 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 LILRB1Q8NHL6 650 aaPredicted RBP17.63■□□□□ 0.41
PTPRF-207ENST00000436724 KCNIP3Q9Y2W7 256 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 HRNRQ86YZ3 2850 aaPredicted RBP17.63■□□□□ 0.41
PTPRF-207ENST00000436724 ADH4P08319 380 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 SSTR5P35346 364 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 TAGLNQ01995 201 aaKnown RBP17.63■□□□□ 0.41
PTPRF-207ENST00000436724 TMEM187Q14656 261 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 TESK1Q15569 626 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 MST1LQ2TV78 715 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 Q8TCH9 128 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 GLYATL2Q8WU03 294 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 GALNT14Q96FL9 552 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 LRRC46Q96FV0 321 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 TP53RKQ96S44 253 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 ARPC5LQ9BPX5 153 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 CISD1Q9NZ45 108 aaKnown RBP17.63■□□□□ 0.41
PTPRF-207ENST00000436724 KCNIP1Q9NZI2 227 aa17.63■□□□□ 0.41
PTPRF-207ENST00000436724 RAI1Q7Z5J4 1906 aaPredicted RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 F5H0A9 414 aaPredicted RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 MPPED1O15442 326 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 TNFSF12O43508 249 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 ZG16O60844 167 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 CD55P08174 381 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 TNFRSF1AP19438 455 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 CYCSP99999 105 aaKnown RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 SAP30LQ9HAJ7 183 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 DCHS2Q6V1P9 2916 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 HCFC1P51610 2035 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 NPIPB11E5RHQ5 1161 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 PHF1O43189 567 aaPredicted RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 HEXAP06865 529 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 APOBEC3AP31941 199 aaPredicted RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 CEACAM6P40199 344 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 TBC1D26Q86UD7 250 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 FAM222BQ8WU58 562 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 ERGIC1Q969X5 290 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 RRNAD1Q96FB5 475 aaKnown RBP17.62■□□□□ 0.41
PTPRF-207ENST00000436724 DIRC2Q96SL1 478 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 DYNLRB1Q9NP97 96 aa17.62■□□□□ 0.41
PTPRF-207ENST00000436724 OOEPA6NGQ2 149 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 GPR31O00270 319 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 HBZP02008 142 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 CCDC71LQ8N9Z2 235 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 RFESDQ8TAC1 157 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 DCUN1D4Q92564 292 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 SNX22Q96L94 193 aa17.61■□□□□ 0.41
PTPRF-207ENST00000436724 DEFB108AA8MXU0 73 aa17.6■□□□□ 0.41
PTPRF-207ENST00000436724 GYPAP02724 150 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms