RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 C8orf31Q8N9H6 132 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 OR1L1Q8NH94 360 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 SETD6Q8TBK2 473 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 WNT10AQ9GZT5 417 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 PLEKHJ1Q9NW61 149 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 ABRACLQ9P1F3 81 aa16.49■□□□□ 0.23
HSPG2-205ENST00000427897 IGHV1-3A0A0C4DH29 117 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
HSPG2-205ENST00000427897 SLC22A1O15245 554 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 PSMD7P51665 324 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 FABP5Q01469 135 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 P2RY14Q15391 338 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 RAB11BQ15907 218 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 CD200R1LQ6Q8B3 271 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 TMEM91Q6ZNR0 172 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 GALMQ96C23 342 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 R3HDM4Q96D70 268 aa16.48■□□□□ 0.23
HSPG2-205ENST00000427897 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-205ENST00000427897 MRPS26Q9BYN8 205 aaKnown RBP16.48■□□□□ 0.23
HSPG2-205ENST00000427897 IGHV3-72A0A0B4J1Y9 119 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 TRDV1A0A1B0GX56 115 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 A0A1W2PRX2 142 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 FAM90A9PA6NNJ1 464 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 CHATP28329 748 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 C6orf201Q7Z4U5 140 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 TGIF2LXQ8IUE1 241 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 OR4F17Q8NGA8 305 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 OR4X2Q8NGF9 303 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 OR2T10Q8NGZ9 312 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 OR4F4Q96R69 305 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 SULT4A1Q9BR01 284 aa16.47■□□□□ 0.23
HSPG2-205ENST00000427897 PKD1L1Q8TDX9 2849 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 SLC17A2O00624 439 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 TXNL1O43396 289 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 RGS11O94810 467 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 OPN1MWP04001 364 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 SMIM18P0DKX4 95 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 OPN1MW2P0DN77 364 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 OPN1MW3P0DN78 364 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 KHDC1LQ5JSQ8 128 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 FAM53AQ6NSI3 398 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-205ENST00000427897 SLC25A48Q6ZT89 311 aaKnown RBP16.46■□□□□ 0.23
HSPG2-205ENST00000427897 ZNF554Q86TJ5 538 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 GAPTQ8N292 157 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 MRPL30Q8TCC3 161 aaKnown RBP16.46■□□□□ 0.23
HSPG2-205ENST00000427897 RTN4IP1Q8WWV3 396 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-205ENST00000427897 NICN1Q9BSH3 213 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 TM2D1Q9BX74 207 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 KCNK15Q9H427 330 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 MBNL3Q9NUK0 354 aaKnown RBP16.46■□□□□ 0.23
HSPG2-205ENST00000427897 STUB1Q9UNE7 303 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 V9GY05 133 aa16.46■□□□□ 0.23
HSPG2-205ENST00000427897 TCRBV4S1A1TA0A5B7 111 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 TMEM14DPA8MWL7 114 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 PDCD5O14737 125 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 CD36P16671 472 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 MYL9P24844 172 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 UNC119Q13432 240 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 TIMM50Q3ZCQ8 353 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 MORN2Q502X0 79 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 FBLN7Q53RD9 439 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 OR2W3Q7Z3T1 314 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 OR52L2PQ8NGH6 319 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 IL1F10Q8WWZ1 152 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 JPT1Q9UK76 154 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 SSR3Q9UNL2 185 aa16.45■□□□□ 0.22
HSPG2-205ENST00000427897 SLC31A2O15432 143 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 FGF16O43320 207 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 FGF9P31371 208 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-205ENST00000427897 CT45A1Q5HYN5 189 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 STEAP3Q658P3 488 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 OR51D1Q8NGF3 324 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 CT45A3Q8NHU0 189 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 EAF1Q96JC9 268 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-205ENST00000427897 STEAP1Q9UHE8 339 aa16.44■□□□□ 0.22
HSPG2-205ENST00000427897 SERPINE3A8MV23 424 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 KCNAB3O43448 404 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 WIPF1O43516 503 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 AMY1AP04745 511 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 AMY2AP04746 511 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 PF4V1P10720 104 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 CD1BP29016 333 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 HTD2P86397 168 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 C1QL4Q86Z23 238 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 FOXRED2Q8IWF2 684 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 C5orf56Q8N8D9 126 aa16.43■□□□□ 0.22
HSPG2-205ENST00000427897 RIMS4Q9H426 269 aaPredicted RBP16.43■□□□□ 0.22
HSPG2-205ENST00000427897 TRAV1-2A0A0B4J238 106 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 PSMB11A5LHX3 300 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 SOCS1O15524 211 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 YPEL1O60688 119 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 MOSP00540 346 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 CD37P11049 281 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 PPP1CCP36873 323 aaKnown RBP16.42■□□□□ 0.22
HSPG2-205ENST00000427897 VEGFCP49767 419 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 ZNF134P52741 427 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 CLDN12P56749 244 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 MRPS15P82914 257 aaKnown RBP16.42■□□□□ 0.22
HSPG2-205ENST00000427897 QRFPP83859 136 aa16.42■□□□□ 0.22
HSPG2-205ENST00000427897 C2orf76Q3KRA6 126 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms