RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 MPZL2O60487 215 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 SAP30O75446 220 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 MOSP00540 346 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ELANEP08246 267 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 SERPINA2P20848 420 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 FASP25445 335 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 SOX6P35712 828 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 VHLP40337 213 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 CCR9P51686 369 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 GP2P55259 537 aaKnown RBP6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 GNMTQ14749 295 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 RSU1Q15404 277 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 DNAL1Q4LDG9 190 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ATAD3CQ5T2N8 411 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 XAF1Q6GPH4 301 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 SERPINA12Q8IW75 414 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 OR13C5Q8NGS8 318 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 OR1L1Q8NH94 360 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 NEK7Q8TDX7 302 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 RFKQ969G6 155 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ALG8Q9BVK2 526 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 PARP11Q9NR21 331 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 FAM118AQ9NWS6 357 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 IMPAD1Q9NX62 359 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ZMAT5Q9UDW3 170 aaKnown RBP6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 ZNF107Q9UII5 783 aaPredicted RBP6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 FBXO7Q9Y3I1 522 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 AP4S1Q9Y587 144 aa6.7□□□□□ -1.34
SHKBP1-220ENST00000599716 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 TMEM30CPA0ZSE6 113 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 MAGEA13PA6NCF6 341 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 C12orf77C9JDV5 145 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 I3L521 148 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 RPSAP08865 295 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 DBTP11182 482 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 HOXB6P17509 224 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ADARB1P78563 741 aaKnown RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 NDPQ00604 133 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 GABPB1Q06547 395 aaPredicted RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ZNF616Q08AN1 781 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 IL13RA2Q14627 380 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 MMDQ15546 238 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 CT45A1Q5HYN5 189 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 PARP16Q8N5Y8 322 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ACBD7Q8N6N7 88 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ZNF439Q8NDP4 499 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 PXT1Q8NFP0 134 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 OR5D14Q8NGL3 314 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 OR4K15Q8NH41 348 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 OR52N1Q8NH53 320 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 OR5AK2Q8NH90 309 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 CT45A3Q8NHU0 189 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 DDB2Q92466 427 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 ARPC1AQ92747 370 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 DLX4Q92988 240 aaPredicted RBP6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 A3GALT2U3KPV4 340 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 TNCP24821 2201 aa6.69□□□□□ -1.34
SHKBP1-220ENST00000599716 IGHV4OR15-8A0A075B7B6 117 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 A0A087WW49 117 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 OVOL1O14753 267 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 SOX15O60248 233 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 IGHV3-11P01762 117 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 MT-ND4P03905 459 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 GP9P14770 177 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 RCC1P18754 421 aaPredicted RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 RAB3AP20336 220 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 CD1BP29016 333 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 BLVRBP30043 206 aaPredicted RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 RBM11P57052 281 aaKnown RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 ECSCRQ19T08 205 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 SYT6Q5T7P8 510 aaPredicted RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 DDI2Q5TDH0 399 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 KCTD20Q7Z5Y7 419 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 OR10A7Q8NGE5 316 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 GON7Q9BXV9 100 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 MRPL20Q9BYC9 149 aaKnown RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 NCOR1P1Q9H4R4 102 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 RHOFQ9HBH0 211 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 GNG12Q9UBI6 72 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 VSIG4Q9Y279 399 aa6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 EXOGQ9Y2C4 368 aaKnown RBP6.68□□□□□ -1.34
SHKBP1-220ENST00000599716 IGHV7-81A0A0B4J1V7 117 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 AIPO00170 330 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 EI24O14681 340 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 MAGEB3O15480 346 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 JTBO76095 146 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 HBZP02008 142 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 IGF1P05019 195 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 OR8U8P0C7N1 319 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 GZMHP20718 246 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 PPP1CCP36873 323 aaKnown RBP6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 OR3A3P47888 321 aa6.67□□□□□ -1.34
SHKBP1-220ENST00000599716 RAB9AP51151 201 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms