RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ZNF565Q8N9K5 539 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 GCDHQ92947 438 aaPredicted RBP8.1□□□□□ -1.11
GGA3-209ENST00000580646 CMTM3Q96MX0 182 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 ZNF48Q96MX3 618 aaPredicted RBP8.1□□□□□ -1.11
GGA3-209ENST00000580646 ZNF714Q96N38 554 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 NEDD4LQ96PU5 975 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 TBX15Q96SF7 602 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 MS4A7Q9GZW8 240 aaPredicted RBP8.1□□□□□ -1.11
GGA3-209ENST00000580646 GAL3ST2Q9H3Q3 398 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 LINC00574Q9H8X3 128 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 ONECUT1Q9UBC0 465 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 SPATA2Q9UM82 520 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 PEX16Q9Y5Y5 336 aa8.1□□□□□ -1.11
GGA3-209ENST00000580646 A0A0A6YYH2 397 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 TMEM30CPA0ZSE6 113 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 A6NJ64 397 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 CLEC2LP0C7M8 214 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 CGB3P0DN86 165 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 CGB7P0DN87 165 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 SLC2A2P11168 524 aaPredicted RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 BLVRBP30043 206 aaPredicted RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 GLIPR1P48060 266 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 COMPP49747 757 aaPredicted RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 SSTP61278 116 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 TRAT1Q6PIZ9 186 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 HEPN1Q6WQI6 88 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 VMO1Q7Z5L0 202 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 OR4M1Q8NGD0 313 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 PLPPR1Q8TBJ4 325 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 ACOT12Q8WYK0 555 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 TNFRSF14Q92956 283 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 NICN1Q9BSH3 213 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 NAA50Q9GZZ1 169 aaKnown RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 RIMS4Q9H426 269 aaPredicted RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 KCNK15Q9H427 330 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 RAB9BQ9NP90 201 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
GGA3-209ENST00000580646 PLEKHJ1Q9NW61 149 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 ZNF581Q9P0T4 197 aa8.09□□□□□ -1.11
GGA3-209ENST00000580646 SOX21Q9Y651 276 aaPredicted RBP8.09□□□□□ -1.11
GGA3-209ENST00000580646 MEIKINA0A087WXM9 373 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 A0A087X0M5 115 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 TRBV6-6A0A0A6YYG2 114 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 TRAV40A0A0B4J280 105 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 KBTBD11-OT1A0A1B0GTJ5 212 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 A0A1B0GX30 115 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 SMIM30A4D0T7 59 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 NPIPB11E5RHQ5 1161 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 RAB27BO00194 218 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 HSPB6O14558 160 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 SOCS1O15524 211 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 ORC5O43913 435 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 MT-ND4P03905 459 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 IGHV1-8P0DP01 117 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 CCL3L1P16619 93 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 GZMHP20718 246 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 VEGFCP49767 419 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 RORCP51449 518 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 PPP5CP53041 499 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 TMEM50BP56557 158 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 TMEM30BQ3MIR4 351 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 IDNKQ5T6J7 187 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 GPR157Q5UAW9 335 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 OR52W1Q6IF63 320 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 ZNF600Q6ZNG1 722 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 Q6ZTK2 550 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 TPRX1Q8N7U7 411 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 OR10R2Q8NGX6 335 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 LGALS14Q8TCE9 139 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 DUX5Q96PT3 197 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 SULT4A1Q9BR01 284 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 PCGF1Q9BSM1 259 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 DCSTAMPQ9H295 470 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 HEXA-AS1Q9H8Q6 139 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 MBNL3Q9NUK0 354 aaKnown RBP8.08□□□□□ -1.12
GGA3-209ENST00000580646 KIF25Q9UIL4 384 aa8.08□□□□□ -1.12
GGA3-209ENST00000580646 CENPVL3A0A0U1RRI6 287 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 DNAJC9-AS1A6NH13 148 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 SERPINE3A8MV23 424 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 UPK1BO75841 260 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 NAPSAO96009 420 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
GGA3-209ENST00000580646 ZNF182P17025 639 aaPredicted RBP8.07□□□□□ -1.12
GGA3-209ENST00000580646 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
GGA3-209ENST00000580646 BTF3P20290 206 aaKnown RBP8.07□□□□□ -1.12
GGA3-209ENST00000580646 UBE2E1P51965 193 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 EFNB2P52799 333 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 PLA2G7Q13093 441 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 C17orf58Q2M2W7 97 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 NKAPLQ5M9Q1 402 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 ZNF880Q6PDB4 577 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 MOB1BQ7L9L4 216 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 C6orf201Q7Z4U5 140 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 TRAPPC6BQ86SZ2 158 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 LINC00518Q8N0U6 118 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 OR13A1Q8NGR1 328 aa8.07□□□□□ -1.12
GGA3-209ENST00000580646 OR5H6Q8NGV6 325 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms