RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 PEX16Q9Y5Y5 336 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 KIAA2026Q5HYC2 2103 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 VWFP04275 2813 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 TRBV5-7A0A0A0MS05 114 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 MAGEA13PA6NCF6 341 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 C15orf65H3BRN8 121 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 RPS11P62280 158 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX6-205ENST00000555648 Q3ZCU0 254 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 FOXB2Q5VYV0 432 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 C10orf99Q6UWK7 81 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 Q6ZPA2 131 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 COMMD1Q8N668 190 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 OR4K15Q8NH41 348 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 DPF1Q92782 380 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 GPR61Q9BZJ8 451 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 BANF2Q9H503 90 aa12.24□□□□□ -0.45
SNX6-205ENST00000555648 AURKAIP1Q9NWT8 199 aaPredicted RBP12.24□□□□□ -0.45
SNX6-205ENST00000555648 TXNL1O43396 289 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 CA11O75493 328 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 MGMTP16455 207 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
SNX6-205ENST00000555648 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
SNX6-205ENST00000555648 DERL3Q96Q80 235 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 UQCC2Q9BRT2 126 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 GON7Q9BXV9 100 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 CST11Q9H112 138 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
SNX6-205ENST00000555648 GHRLQ9UBU3 117 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 PSORS1C1Q9UIG5 152 aa12.23□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A10PA6NDY2 464 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A7PA6NKC0 464 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A23PA8MXZ1 464 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 C12orf77C9JDV5 145 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 MOSP00540 346 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 CD1AP06126 327 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 GNAO1P09471 354 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 FUT3P21217 361 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 RPL23AP62750 156 aaKnown RBP12.22□□□□□ -0.45
SNX6-205ENST00000555648 GPR50Q13585 617 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 ZNF485Q8NCK3 441 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
SNX6-205ENST00000555648 TFAP2CQ92754 450 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 NEDD4LQ96PU5 975 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 PLCXD1Q9NUJ7 323 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 LINC00527Q9UJ94 153 aa12.22□□□□□ -0.45
SNX6-205ENST00000555648 UBE2QL1A1L167 161 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 AP4M1O00189 453 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
SNX6-205ENST00000555648 MPIG6BO95866 241 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 IGHG2P01859 326 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 HBZP02008 142 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 GLAP06280 429 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 CD1BP29016 333 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 SLC6A1P30531 599 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 EBI3Q14213 229 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 NKAPLQ5M9Q1 402 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.45
SNX6-205ENST00000555648 GLT8D1Q68CQ7 371 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 STPG2Q8N412 459 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 MS4A15Q8N5U1 240 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 NANOGP1Q8N7R0 232 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 OR8H1Q8NGG4 311 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 FAM46BQ96A09 425 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 MND1Q9BWT6 205 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 OR2S2Q9NQN1 319 aa12.21□□□□□ -0.45
SNX6-205ENST00000555648 LIN7CQ9NUP9 197 aaKnown RBP12.21□□□□□ -0.45
SNX6-205ENST00000555648 PDCD6O75340 191 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 UBBP0CG47 229 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
SNX6-205ENST00000555648 ACSM3Q53FZ2 586 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 TEX38Q6PEX7 206 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 SLC25A48Q6ZT89 311 aaKnown RBP12.2□□□□□ -0.46
SNX6-205ENST00000555648 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 TMEM104Q8NE00 496 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 KLHL30-AS1Q8NEE0 82 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
SNX6-205ENST00000555648 ABCG5Q9H222 651 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 TAF9BQ9HBM6 251 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 SCN3BQ9NY72 215 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 PLXNB1O43157 2135 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 NOTCH3Q9UM47 2321 aa12.2□□□□□ -0.46
SNX6-205ENST00000555648 PTGES3LE9PB15 166 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
SNX6-205ENST00000555648 SLC31A2O15432 143 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 RGS11O94810 467 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 RCC1P18754 421 aaPredicted RBP12.19□□□□□ -0.46
SNX6-205ENST00000555648 VHLP40337 213 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 GPR12P47775 334 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 PNLIPRP3Q17RR3 467 aa12.19□□□□□ -0.46
SNX6-205ENST00000555648 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms