RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ST8SIA3O43173 380 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 TRGC1P0CF51 173 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 MSR1P21757 451 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 FOXF2Q12947 444 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 Q3ZCU0 254 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 DOK3Q7L591 496 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 HIST3H2BBQ8N257 126 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 FRZBQ92765 325 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 MED12LQ86YW9 2145 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 SMG1Q96Q15 3661 aaKnown RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 IGSF23A1L1A6 192 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 FOXI3A8MTJ6 420 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 AQP7O14520 342 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 ST8SIA5O15466 376 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 GUCA1AP43080 201 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 TLE1Q04724 770 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 HIKESHIQ53FT3 197 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF100Q8IYN0 542 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 CNEP1R1Q8N9A8 125 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 ABHD5Q8WTS1 349 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 ZCCHC14Q8WYQ9 949 aaKnown RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 FOXB1Q99853 325 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 PNRC2Q9NPJ4 139 aaKnown RBP8.49□□□□□ -1.05
PRKCH-211ENST00000555082 TMEM38BQ9NVV0 291 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 SH3BGRL2Q9UJC5 107 aa8.49□□□□□ -1.05
PRKCH-211ENST00000555082 COL6A6A6NMZ7 2263 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 BTBD17A6NE02 478 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SEC14L6B5MCN3 397 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PHOX2AO14813 284 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PGA5P0DJD9 388 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 DUSP1P28562 367 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 DDTP30046 118 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 ARF1P84077 181 aaKnown RBP8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PPA1Q15181 289 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SLC22A25Q6T423 547 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 APH1AQ96BI3 265 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SARAFQ96BY9 339 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 BCO1Q9HAY6 547 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 CLCF1Q9UBD9 225 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 A0A1W2PR80 420 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 GEMIN2O14893 280 aaKnown RBP8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SSSCA1O60232 199 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
PRKCH-211ENST00000555082 LMO1P25800 156 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SSTP61278 116 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 USF2Q15853 346 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF774Q6NX45 483 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 VWA1Q6PCB0 445 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 LIAT1Q6ZQX7 453 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SLC35G3Q8N808 338 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 OR10AD1Q8NGE0 317 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 OR2AE1Q8NHA4 323 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 POM121Q96HA1 1249 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SNX22Q96L94 193 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 SLC2A9Q9NRM0 540 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 WSB1Q9Y6I7 421 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PKD1L2Q7Z442 2459 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 PCNX1Q96RV3 2341 aa8.48□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF32P17041 273 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 EPHA1P21709 976 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 MAS1LP35410 378 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF133P52736 654 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 MTCP1P56278 107 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 GNMTQ14749 295 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 ICAM4Q14773 271 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 GPR157Q5UAW9 335 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 REC114Q7Z4M0 266 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 SSC4DQ8WTU2 575 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 CA5BP1Q8WTZ4 195 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 TMEM171Q8WVE6 324 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 TMEM45BQ96B21 275 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 TP53RKQ96S44 253 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 PLEK2Q9NYT0 353 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 ZGRF1Q86YA3 2104 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 OR5H1A6NKK0 313 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 HLA-HP01893 362 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 PLA2G5P39877 138 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 MRPS34P82930 218 aaKnown RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 RNPS1Q15287 305 aaKnown RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 CLEC12BQ2HXU8 276 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 RSPO1Q2MKA7 263 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 PIGYQ3MUY2 71 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 ACSF3Q4G176 576 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 CXorf66Q5JRM2 361 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 ZNF880Q6PDB4 577 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 OR2C3Q8N628 320 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 SNRNP40Q96DI7 357 aaKnown RBP8.47□□□□□ -1.05
PRKCH-211ENST00000555082 SSX3Q99909 188 aa8.47□□□□□ -1.05
PRKCH-211ENST00000555082 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms