RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 OR2V1Q8NHB1 315 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 RPUSD4Q96CM3 377 aaKnown RBP11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 LAMP3Q9UQV4 416 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 DOCK7Q96N67 2140 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 TRBV24-1A0A075B6N3 115 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 HS3ST1O14792 307 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 CST2P09228 141 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 ZNF124Q15973 351 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 HLA-BQ31612 363 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 OR56B2PQ8NGI1 322 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 HIST1H2AAQ96QV6 131 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 FOXB1Q99853 325 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 MTCH1Q9NZJ7 389 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 CACNG5Q9UF02 275 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 RARRES3Q9UL19 164 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 KIAA1549Q9HCM3 1950 aa11.89□□□□□ -0.51
SCNN1A-215ENST00000540037 TUSC2O75896 110 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 IGKV1D-33P01593 117 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 IGKV1-33P01594 117 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 IGKV1-39P01597 117 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 IGKV1D-39P04432 117 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 F2RP25116 425 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 PCOLCEQ15113 449 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 OR8G1Q15617 311 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 SSX2Q16385 188 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 PCSK4Q6UW60 755 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 OR5D13Q8NGL4 314 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 IL1F10Q8WWZ1 152 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 OCIAD1Q9NX40 245 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 NCKAP5O14513 1909 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 COL6A3P12111 3177 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 ARGFXA6NJG6 315 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 DEFA4P12838 97 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 CD81P60033 236 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 RDH5Q92781 318 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 SMIM7Q9BQ49 75 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 TMEM242Q9NWH2 141 aa11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 ERRFI1Q9UJM3 462 aaPredicted RBP11.88□□□□□ -0.51
SCNN1A-215ENST00000540037 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 EREGO14944 169 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 SYNGR1O43759 233 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 CXCL13O43927 109 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 DFFBO76075 338 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OPN1MWP04001 364 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OPN1MW2P0DN77 364 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OPN1MW3P0DN78 364 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 PAX1P15863 534 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 DSCR4P56555 118 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 CCL7P80098 99 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 PNRC1Q12796 327 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 TESK1Q15569 626 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 DBX2Q6ZNG2 339 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 ZNF525Q8N782 197 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OR5R1Q8NH85 324 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 PCGF1Q9BSM1 259 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 R4GN57 208 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 FAM186AA6NE01 2351 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 H0Y980 276 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 CYTIPO60759 359 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 MDH2P40926 338 aaKnown RBP11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 AAED1Q7RTV5 226 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 OR1A1Q9P1Q5 309 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 WASF3Q9UPY6 502 aa11.87□□□□□ -0.51
SCNN1A-215ENST00000540037 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 MAP1LC3B2A6NCE7 125 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 LRRC3CA6NJW4 275 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 ZNF737O75373 536 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 SERPINE2P07093 398 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 PFN1P07737 140 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 ZDHHC23Q8IYP9 409 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 OR5T1Q8NG75 326 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 ABHD14BQ96IU4 210 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 MAP1LC3BQ9GZQ8 125 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 A0A096LPE4 126 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 IFNA10P01566 189 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 RFPL3SP0C7P2 107 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 LBX1P52954 281 aa11.86□□□□□ -0.51
SCNN1A-215ENST00000540037 GNB2P62879 340 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms