RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 SPXQ9BT56 116 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 NDEL1Q9GZM8 345 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 METTL8Q9H825 291 aaKnown RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 PAK1IP1Q9NWT1 392 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SLC17A7Q9P2U7 560 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 BTNL2Q9UIR0 455 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 FOXJ3Q9UPW0 622 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 DNAJC15Q9Y5T4 150 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SOX21Q9Y651 276 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 IGHV1OR15-1A0A075B7D0 117 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 IGHV7-81A0A0B4J1V7 117 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RBMY1BA6NDE4 496 aaKnown RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RBMY1EA6NEQ0 496 aaKnown RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 FAM74A7A6NL05 159 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 M0R1W7 72 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SGCEO43556 437 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 GMDSO60547 372 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SERPINB7O75635 380 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 IGHV3-48P01763 117 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 OPN1SWP03999 348 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 BCHEP06276 602 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 MMP7P09237 267 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RBMY1DP0C7P1 496 aaKnown RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RRASP10301 218 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 CD28P10747 220 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 THRBP10828 461 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ETS2P15036 469 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF32P17041 273 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 MSR1P21757 451 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 PPIBP23284 216 aaKnown RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 GABRR1P24046 479 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 MAPK3P27361 379 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 IFNA8P32881 189 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 KIR2DS2P43631 304 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 CAMLGP49069 296 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RGS8P57771 180 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 DSTNP60981 165 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 PSG4Q00888 419 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 CASP8Q14790 479 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 OR8G1Q15617 311 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SNCBQ16143 134 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 LY6EQ16553 131 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 HIST3H3Q16695 136 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 MICBQ29980 383 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 FAM74A3Q4VXF1 159 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 C10orf128Q5T292 105 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 HHATQ5VTY9 493 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 Q6P435 159 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 LYPD2Q6UXB3 125 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 FBXW12Q6X9E4 464 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 TRMT10CQ7L0Y3 403 aaKnown RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 HMGN2P46Q86SG4 172 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SLC30A8Q8IWU4 369 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF101Q8IZC7 436 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 CLECL1Q8IZS7 167 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 KRTCAP2Q8N6L1 136 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SPATA4Q8NEY3 305 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 NOXO1Q8NFA2 376 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 OR5AU1Q8NGC0 362 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF420Q8TAQ5 688 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 C7orf33Q8WU49 177 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 C10orf82Q8WW14 230 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 APOBEC3DQ96AK3 386 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ISOC1Q96CN7 298 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 FMO2Q99518 471 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 TXN2Q99757 166 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 C1orf50Q9BV19 199 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 OR2H1Q9GZK4 316 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 DNTTIP1Q9H147 329 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 WDR55Q9H6Y2 383 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RMND5AQ9H871 391 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 SLCO1B3Q9NPD5 702 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 INIPQ9NRY2 104 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 DCAF16Q9NXF7 216 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 PSMC3IPQ9P2W1 217 aaPredicted RBP2.35□□□□□ -2.03
PABPC1-206ENST00000518293 KAAG1Q9UBP8 84 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ATPIF1Q9UII2 106 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF229Q9UJW7 825 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 RYR3Q15413 4870 aa2.35□□□□□ -2.03
PABPC1-206ENST00000518293 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 OR6C6A6NF89 314 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 A6NIZ1 184 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF705EA8MWA4 302 aaPredicted RBP2.34□□□□□ -2.03
PABPC1-206ENST00000518293 IQCF6A8MYZ5 107 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 E9PBE3 544 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 RFXANKO14593 260 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 CHP2O43745 196 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 OR10H3O60404 316 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 PLIN3O60664 434 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 PTBP3O95758 552 aaKnown RBP2.34□□□□□ -2.03
PABPC1-206ENST00000518293 BGLAPP02818 100 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 IFNA6P05013 189 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 IL6P05231 212 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 PGA4P0DJD7 388 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 PGA3P0DJD8 388 aa2.34□□□□□ -2.03
PABPC1-206ENST00000518293 MUC1P15941 1255 aaPredicted RBP2.34□□□□□ -2.03
PABPC1-206ENST00000518293 LAP3P28838 519 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms