RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 EGR4Q05215 589 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CD69Q07108 199 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 KIR2DS3Q14952 304 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 MEP1BQ16820 701 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF658BQ4V348 819 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 VAX1Q5SQQ9 334 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SUSD4Q5VX71 490 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 UFSP1Q6NVU6 142 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 FBXL22Q6P050 247 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF880Q6PDB4 577 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC25A34Q6PIV7 304 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SBSNQ6UWP8 590 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 FOXI2Q6ZQN5 318 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 Q6ZWC4 215 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 C16orf82Q7Z2V1 217 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF547Q8IVP9 402 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 UBALD2Q8IYN6 164 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLECL1Q8IZS7 167 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 TTC9CQ8N5M4 171 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM99Q8N816 258 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRRC75AQ8NAA5 344 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SCCPDHQ8NBX0 429 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF439Q8NDP4 499 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR10V1Q8NGI7 309 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 VSTM2AQ8TAG5 236 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 MRPL30Q8TCC3 161 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 MRAPQ8TCY5 172 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC25A43Q8WUT9 341 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 NEIL2Q969S2 332 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 WBP2Q969T9 261 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM3DQ96BQ1 224 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 PCED1BQ96HM7 432 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZBTB45Q96K62 511 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPER1Q99527 375 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SMIM7Q9BQ49 75 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRRC61Q9BV99 259 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 HCAR1Q9BXC0 346 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 QTRT1Q9BXR0 403 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF160Q9HCG1 818 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LHX3Q9UBR4 397 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 NAT8BQ9UHF3 227 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPR132Q9UNW8 380 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 PSG8Q9UQ74 426 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LIPGQ9Y5X9 500 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF780BQ9Y6R6 833 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LOC285556D6RIA3 1793 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A087WUU8 490 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A087WV62 115 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 NSG1A0A0A6YYJ2 146 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRBV5-5A0A0J9YX44 114 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 CENPVL1A0A0U1RR11 272 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A1W2PQM1 296 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC38A8A6NNN8 435 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 B9A039 149 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM262E9PQX1 116 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 M0QYG6 137 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 P2RY10O00398 339 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 HS3ST1O14792 307 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RAB29O14966 203 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PITX3O75364 302 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SAP30O75446 220 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 KBTBD11O94819 623 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 UTS2O95399 124 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TNFP01375 233 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TTRP02766 147 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SERPINE2P07093 398 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FABP2P12104 132 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF708P17019 499 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADRA2CP18825 462 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 AADACP22760 399 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ACRV1P26436 265 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 TIA1P31483 386 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OPRM1P35372 400 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PNPLA4P41247 253 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 KIR2DS4P43632 304 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR1D4P47884 311 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PSMB3P49720 205 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 LHX2P50458 406 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC16A1P53985 500 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPP1CBP62140 327 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RPS11P62280 158 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 GRB2P62993 217 aaKnown RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF85Q03923 595 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FMODQ06828 376 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 DPTQ07507 201 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLCXD2Q0VAA5 305 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 LAMTOR4Q0VGL1 99 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ELAVL3Q14576 367 aaKnown RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 PDCD1Q15116 288 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF74Q16587 644 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 BVES-AS1Q5T3Y7 98 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FNDC7Q5VTL7 733 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM90A2PQ658T7 463 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 FCRL6Q6DN72 434 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPSB3Q6PJ21 355 aa4.13□□□□□ -1.75
HMGB1P19-201ENST00000517578 RFLNAQ6ZTI6 216 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms