RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 J3KRW8 73 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 RHBDL1O75783 438 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 BMI1P35226 326 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 UBE2NP61088 152 aaKnown RBP12.58□□□□□ -0.4
CHTOP-206ENST00000495554 PCSK4Q6UW60 755 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 C20orf204Q6ZNR8 217 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 BIN3Q9NQY0 253 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 DLL3Q9NYJ7 618 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 CLCF1Q9UBD9 225 aa12.58□□□□□ -0.4
CHTOP-206ENST00000495554 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
CHTOP-206ENST00000495554 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 TM4SF5O14894 197 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 EIF3GO75821 320 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHTOP-206ENST00000495554 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 FAM74A3Q4VXF1 159 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF880Q6PDB4 577 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
CHTOP-206ENST00000495554 BSCL2Q96G97 398 aaPredicted RBP12.57□□□□□ -0.4
CHTOP-206ENST00000495554 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 DEGS1O15121 323 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 OPN1MWP04001 364 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 OPN1MW2P0DN77 364 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 OPN1MW3P0DN78 364 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 SPINK2P20155 84 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 UCP1P25874 307 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 NKX2-1P43699 371 aaPredicted RBP12.57□□□□□ -0.4
CHTOP-206ENST00000495554 PPP1CBP62140 327 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 Q6ZRG5 221 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 Q8IYB0 196 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 ABHD14BQ96IU4 210 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 GINS3Q9BRX5 216 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
CHTOP-206ENST00000495554 LAMA5O15230 3695 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 LRP5LA4QPB2 252 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 HSD17B6O14756 317 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF44P15621 663 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 MUC1P15941 1255 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-206ENST00000495554 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-206ENST00000495554 VDAC1P21796 283 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 S100GP29377 79 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 KRTCAP3Q53RY4 240 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 MYPOPQ86VE0 399 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-206ENST00000495554 NRIP2Q9BQI9 281 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 WFDC1Q9HC57 220 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 POLDIP2Q9Y2S7 368 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 OR2W1Q9Y3N9 320 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 CLEC18AA5D8T8 446 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 CELA3BP08861 270 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 SPP1P10451 314 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-206ENST00000495554 HLA-DRB3P79483 266 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 NHLH2Q02577 135 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 GCNT2Q8N0V5 402 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 OR2C3Q8N628 320 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 CLEC18CQ8NCF0 446 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 IL22RA2Q969J5 263 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 BOD1Q96IK1 185 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 OR2J1Q9GZK6 312 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 TREM2Q9NZC2 230 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
CHTOP-206ENST00000495554 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 H0Y980 276 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 DANCRP0C864 163 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 MDH2P40926 338 aaKnown RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 GUSBP1Q15486 140 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF324BQ6AW86 544 aaPredicted RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 Q6P435 159 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 CABLES2Q9BTV7 478 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 C11orf1Q9H5F2 150 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 A0A1W2PR80 420 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 ADAM20O43506 726 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 PGLYRP1O75594 196 aaPredicted RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 CEACAM4O75871 244 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 CD5P06127 495 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 Q6ZT83 130 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
CHTOP-206ENST00000495554 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 OR5D13Q8NGL4 314 aa12.55□□□□□ -0.4
CHTOP-206ENST00000495554 VSTM5A8MXK1 200 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 LYZL6O75951 148 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
CHTOP-206ENST00000495554 RAB5CP51148 216 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 ERVK11-1P61568 191 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHTOP-206ENST00000495554 INO80CQ6PI98 192 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms