RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 ZFP57Q9NU63 452 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 UFSP2Q9NUQ7 469 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 TAAR3PQ9P1P4 343 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 SLC25A15Q9Y619 301 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 RAB19A4D1S5 217 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 A6NLC8 198 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 C1QTNF9BB2RNN3 333 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 H0Y980 276 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 GPR137BO60478 399 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 TFF1P04155 84 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 ACAA1P09110 424 aaPredicted RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 EIF2S3P41091 472 aaKnown RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 NHLH2Q02577 135 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 ZNF718Q3SXZ3 478 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 NMSQ5H8A3 153 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 ZNF474Q6S9Z5 364 aaPredicted RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 WDR82Q6UXN9 313 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 OR10V1Q8NGI7 309 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 OR51H1Q8NH63 302 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 SMIM8Q96KF7 97 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 CACNA1DQ01668 2161 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 GCH1P30793 250 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 NKX2-1P43699 371 aaPredicted RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 ARHGDIBP52566 201 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 POLR2GP62487 172 aaKnown RBP eCLIP10.97□□□□□ -0.65
SEC13-216ENST00000479868 BTN1A1Q13410 526 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 CXorf66Q5JRM2 361 aaPredicted RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 PXDC1Q5TGL8 231 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 GPR157Q5UAW9 335 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 UBAC2Q8NBM4 344 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
SEC13-216ENST00000479868 ARL11Q969Q4 196 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 TLNRD1Q9H1K6 362 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 WIPI2Q9Y4P8 454 aa10.97□□□□□ -0.65
SEC13-216ENST00000479868 APC2O95996 2303 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 ACACAQ13085 2346 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 PROB1E7EW31 1015 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 HSPA12AO43301 675 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 VDAC1P21796 283 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 LPAR6P43657 344 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 GNMTQ14749 295 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 MSMPQ1L6U9 139 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.65
SEC13-216ENST00000479868 EIF5AL1Q6IS14 154 aaKnown RBP10.96□□□□□ -0.65
SEC13-216ENST00000479868 ATRAIDQ6UW56 229 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 UQCC3Q6UW78 93 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 HRH4Q9H3N8 390 aa10.96□□□□□ -0.65
SEC13-216ENST00000479868 DUXBA0A1W2PPF3 345 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 CLEC18AA5D8T8 446 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 MED6O75586 246 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 PSG2P11465 335 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 TUBG1P23258 451 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 SULT1A2P50226 295 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 ZNF83P51522 516 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 HMGN3Q15651 99 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 FIP1L1Q6UN15 594 aaKnown RBP10.96□□□□□ -0.66
SEC13-216ENST00000479868 ACP7Q6ZNF0 438 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 CLEC18CQ8NCF0 446 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 S100PBPQ96BU1 408 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.66
SEC13-216ENST00000479868 SPIN2AQ99865 258 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 SPIN2BQ9BPZ2 258 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 WASF3Q9UPY6 502 aa10.96□□□□□ -0.66
SEC13-216ENST00000479868 A0A0G2JRQ6 117 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 NXPH3O95157 252 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
SEC13-216ENST00000479868 HEXAP06865 529 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 LMO1P25800 156 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 ASCL1P50553 236 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 C1orf185Q5T7R7 199 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 LRFN3Q9BTN0 628 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 MMP26Q9NRE1 261 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 ABCD4O14678 606 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 SSSCA1O60232 199 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 S100GP29377 79 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 CEACAM6P40199 344 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 EWSR1Q01844 656 aaKnown RBP eCLIP10.95□□□□□ -0.66
SEC13-216ENST00000479868 AESQ08117 197 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 LRP11Q86VZ4 500 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 LURAP1LQ8IV03 231 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 OR2C3Q8N628 320 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 FAM169BQ8N8A8 192 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 IL22RA2Q969J5 263 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 PPP1R3CQ9UQK1 317 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 SPEF1Q9Y4P9 236 aa10.95□□□□□ -0.66
SEC13-216ENST00000479868 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 TMEM218A2RU14 115 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 OR8U9P0C7N5 309 aa10.94□□□□□ -0.66
SEC13-216ENST00000479868 ADCYAP1P18509 176 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms