RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	SLC35A2	P78381	396 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	EMX1	Q04741	257 aa	Predicted RBP	11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR8H3	Q8N146	312 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	MS4A15	Q8N5U1	240 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	C5orf56	Q8N8D9	126 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	ZNF439	Q8NDP4	499 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR4K15	Q8NH41	348 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	THRSP	Q92748	146 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	ST6GALNAC6	Q969X2	333 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	R3HDM4	Q96D70	268 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	TMED9	Q9BVK6	235 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	ETAA1	Q9NY74	926 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596		M0QZK8	103 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGKV1D-33	P01593	117 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGKV1-33	P01594	117 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	RCC1	P18754	421 aa	Predicted RBP	11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	REG1B	P48304	166 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	GPR50	Q13585	617 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	EBI3	Q14213	229 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	SPHAR	Q15513	63 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	SYT6	Q5T7P8	510 aa	Predicted RBP	11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR4F17	Q8NGA8	305 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR1L1	Q8NH94	360 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	MYDGF	Q969H8	173 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	FAM46B	Q96A09	425 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR4F4	Q96R69	305 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	DUSP21	Q9H596	190 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	PEX16	Q9Y5Y5	336 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	NOTCH3	Q9UM47	2321 aa		11.92	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGHV1-3	A0A0C4DH29	117 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596		A0A1W2PRX2	142 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596		H0YHG0	523 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	CCRL2	O00421	344 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	HBZ	P02008	142 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	GLA	P06280	429 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	CD37	P11049	281 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	TMEM11	P17152	192 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	FUT3	P21217	361 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	MYF6	P23409	242 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	ZNF134	P52741	427 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	HES1	Q14469	280 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	HNF4G	Q14541	408 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596		Q3ZCU0	254 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	C9orf152	Q5JTZ5	239 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	C1orf100	Q5SVJ3	147 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR10K2	Q6IF99	312 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	SLC25A48	Q6ZT89	311 aa	Known RBP	11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	C5orf24	Q7Z6I8	188 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596		Q8N6K4	173 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	MRPL30	Q8TCC3	161 aa	Known RBP	11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	PHYHIP	Q92561	330 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	RBMXL1	Q96E39	390 aa	Known RBP	11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	KCNK15	Q9H427	330 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	MBNL3	Q9NUK0	354 aa	Known RBP	11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	GHRL	Q9UBU3	117 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	TRAPPC2L	Q9UL33	140 aa		11.91	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGHV3-72	A0A0B4J1Y9	119 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	UBE2QL1	A1L167	161 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	FGF16	O43320	207 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	PDCD6	O75340	191 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	CA11	O75493	328 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	GAPDH	P04406	335 aa	Known RBP	11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	UCHL1	P09936	223 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	VSIG8	P0DPA2	414 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	ZNF137P	P52743	207 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	MED22	Q15528	200 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	OXLD1	Q5BKU9	147 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	CT45A1	Q5HYN5	189 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	RBM48	Q5RL73	367 aa	Known RBP	11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	C6orf183	Q5T699	404 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	LIPK	Q5VXJ0	399 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	CEACAM19	Q7Z692	300 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	MOB3B	Q86TA1	216 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	IZUMO1	Q8IYV9	350 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR10V1	Q8NGI7	309 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	CT45A3	Q8NHU0	189 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	GFI1	Q99684	422 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	ANKRD60	Q9BZ19	345 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	CST11	Q9H112	138 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	SCN3B	Q9NY72	215 aa		11.9	□□□□□ -0.5
CCNL1-222	ENST00000479596	TCRBV4S1A1T	A0A5B7	111 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	ZNF736	B4DX44	427 aa	Predicted RBP	11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	SPINT2	O43291	252 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	MPIG6B	O95866	241 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	PRB2	P02812	416 aa	Predicted RBP	11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	UBB	P0CG47	229 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	SRM	P19623	302 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	CHAT	P28329	748 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	QRFP	P83859	136 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	UNC119	Q13432	240 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	TMEM30B	Q3MIR4	351 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	HSD17B12	Q53GQ0	312 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	TMEM91	Q6ZNR0	172 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596		Q6ZPA2	131 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	PRR18	Q8N4B5	295 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	OR4X2	Q8NGF9	303 aa		11.89	□□□□□ -0.51
CCNL1-222	ENST00000479596	EAF1	Q96JC9	268 aa	Predicted RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms