RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CD80P33681 288 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CCDC71LQ8N9Z2 235 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 ZNRF1Q8ND25 227 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 DYNLRB1Q9NP97 96 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 OR1A1Q9P1Q5 309 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CCSO14618 274 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 SNAPC5O75971 98 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 IFITM2Q01629 132 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 PHLDA2Q53GA4 152 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 ZNF788Q6ZQV5 615 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 ZNF818PQ6ZRF7 136 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 C1orf87Q8N0U7 546 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 MUC15Q8N387 334 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 LRTM2Q8N967 370 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 GALMQ96C23 342 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 FAM234AQ9H0X4 552 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 DCAF16Q9NXF7 216 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 HCFC1P51610 2035 aa12.68□□□□□ -0.38
ACTB-204ENST00000425660 GPR31O00270 319 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 MPPED1O15442 326 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 TMEM187Q14656 261 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 ZNF565Q8N9K5 539 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 OR13A1Q8NGR1 328 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 SECTM1Q8WVN6 248 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
ACTB-204ENST00000425660 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 ODAMA1E959 279 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 HMSDA8MTL9 139 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 TMEM178BH3BS89 294 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 OR5AC1P0C628 307 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 GZMHP20718 246 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 P2RX3P56373 397 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 FGL1Q08830 312 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 TPRX1Q8N7U7 411 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 BVESQ8NE79 360 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 GRPEL2Q8TAA5 225 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 MRGPRDQ8TDS7 321 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 GLYATL2Q8WU03 294 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 PDCD10Q9BUL8 212 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 NMES1Q9C002 83 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 ZNF665Q9H7R5 613 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 RDH8Q9NYR8 311 aa12.67□□□□□ -0.38
ACTB-204ENST00000425660 PKDREJQ9NTG1 2253 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 TRAV38-1A0A0B4J264 116 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 C15orf65H3BRN8 121 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 RGS13O14921 159 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 SIGLEC5O15389 551 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 HSPA12AO43301 675 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 ADAP1O75689 374 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 C1QL1O75973 258 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 IGLV2-14P01704 120 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 HBZP02008 142 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 WNT2P09544 360 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 SNRPD2P62316 118 aaKnown RBP12.66□□□□□ -0.38
ACTB-204ENST00000425660 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
ACTB-204ENST00000425660 LGALSLQ3ZCW2 172 aaPredicted RBP12.66□□□□□ -0.38
ACTB-204ENST00000425660 GSG1LQ6UXU4 331 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 OR10V1Q8NGI7 309 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 OR1L1Q8NH94 360 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 MSI2Q96DH6 328 aaKnown RBP12.66□□□□□ -0.38
ACTB-204ENST00000425660 SEC22AQ96IW7 307 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 GON7Q9BXV9 100 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 CCL28Q9NRJ3 127 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
ACTB-204ENST00000425660 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 C3orf85A0A1B0GTC6 90 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 LGALS8O00214 317 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 IL2RGP31785 369 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 SSTR5P35346 364 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 CEACAM6P40199 344 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 HTD2P86397 168 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 DYSFO75923 2080 aa12.65□□□□□ -0.38
ACTB-204ENST00000425660 FAM25EA8MYX2 175 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 PPOXP50336 477 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.39
ACTB-204ENST00000425660 LIAT1Q6ZQX7 453 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 TBC1D26Q86UD7 250 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 ZNF843Q8N446 348 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 UBALD1Q8TB05 177 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 CCL17Q92583 94 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 TP53RKQ96S44 253 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.39
ACTB-204ENST00000425660 OR6C3Q9NZP0 311 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms