RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 OR1K1Q8NGR3 316 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 BORCS8Q96FH0 119 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF845Q96IR2 970 aaPredicted RBP14.69□□□□□ -0.06
PTPRA-205ENST00000399903 EGR1P18146 543 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 HNF1AP20823 631 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 TNFSF10P50591 281 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 TMEM41BQ5BJD5 291 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 FAM78BQ5VT40 261 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 SLC25A26Q70HW3 274 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 IGHV3-15A0A0B4J1V0 119 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 BLACEA4D250 179 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 GALNSP34059 522 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 OR2T10Q8NGZ9 312 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 GATAD1Q8WUU5 269 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 SLC25A22Q9H936 323 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 ADAMTS9Q9P2N4 1935 aa14.69□□□□□ -0.06
PTPRA-205ENST00000399903 LIPT2A6NK58 231 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 FOXI3A8MTJ6 420 aaPredicted RBP14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CDS2O95674 445 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 OR8G2PQ6IF36 304 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 R3HDM4Q96D70 268 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 TMEM222Q9H0R3 208 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CISD1Q9NZ45 108 aaKnown RBP14.68□□□□□ -0.06
PTPRA-205ENST00000399903 NAT8Q9UHE5 227 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 G3V3Y1 287 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 PMP22Q01453 160 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 SNAI3Q3KNW1 292 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CRIP3Q6Q6R5 217 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 H1FOOQ8IZA3 346 aaPredicted RBP14.68□□□□□ -0.06
PTPRA-205ENST00000399903 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 FRYQ5TBA9 3013 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CNN1P51911 297 aaKnown RBP14.68□□□□□ -0.06
PTPRA-205ENST00000399903 PRAMEF20Q5VT98 475 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CCDC74BQ96LY2 380 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 TM2D1Q9BX74 207 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 B3GAT1Q9P2W7 334 aa14.68□□□□□ -0.06
PTPRA-205ENST00000399903 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 M0R135 149 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 NUPR1O60356 82 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 PFN1P07737 140 aaKnown RBP14.67□□□□□ -0.06
PTPRA-205ENST00000399903 MALLQ13021 153 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 ENDOGQ14249 297 aaKnown RBP14.67□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF726P1Q15940 193 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 SELENOHQ8IZQ5 122 aaKnown RBP14.67□□□□□ -0.06
PTPRA-205ENST00000399903 C11orf42Q8N5U0 333 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 OR51G1Q8NGK1 321 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 VN1R17PQ8TDU5 208 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 MOB3AQ96BX8 217 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF799Q96GE5 643 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 CCL28Q9NRJ3 127 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 IGHV5-10-1A0A0J9YXX1 117 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF816-ZNF321PA0A0X1KG74 233 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 IFNA1P01562 189 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 LCATP04180 440 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 PATE4P0C8F1 98 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 DEFA4P12838 97 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 EPHA8P29322 1005 aaPredicted RBP14.67□□□□□ -0.06
PTPRA-205ENST00000399903 DCAF10Q5QP82 559 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 ZNF818PQ6ZRF7 136 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 OR8G5Q8NG78 346 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 CTDSP1Q9GZU7 261 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 TRAPPC1Q9Y5R8 145 aa14.67□□□□□ -0.06
PTPRA-205ENST00000399903 TRAV34A0A0B4J273 112 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 B4E171 279 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 HOXA6P31267 233 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 TSPAN7P41732 249 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 RPL23P62829 140 aaKnown RBP14.66□□□□□ -0.06
PTPRA-205ENST00000399903 RNF151Q2KHN1 245 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 SPANXN5Q5MJ07 72 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 C1orf194Q5T5A4 169 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 ODF3L1Q8IXM7 274 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 LPAR2Q9HBW0 351 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 GRB2P62993 217 aaKnown RBP14.66□□□□□ -0.06
PTPRA-205ENST00000399903 DPPA3Q6W0C5 159 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 ANKRD37Q7Z713 158 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 LRTM2Q8N967 370 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 LOC400499M0QZD8 3231 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 LY6G6EA0A0G2JKS1 128 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 UBE2L5PA0A1B0GUS4 154 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 AQP7O14520 342 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 EFNA2O43921 213 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 RAB35Q15286 201 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 EXT1Q16394 746 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 TCF23Q7RTU1 214 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 TMEM170AQ8WVE7 144 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 FAM103A1Q9BTL3 118 aaKnown RBP14.66□□□□□ -0.06
PTPRA-205ENST00000399903 PNRC2Q9NPJ4 139 aaKnown RBP14.66□□□□□ -0.06
PTPRA-205ENST00000399903 TMEM242Q9NWH2 141 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 ALKBH4Q9NXW9 302 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 U3KQA8 63 aa14.66□□□□□ -0.06
PTPRA-205ENST00000399903 OR10J1P30954 320 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 CCKARP32238 428 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 OR10G3Q8NGC4 313 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 PIGCQ92535 297 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 DNAJC4Q9NNZ3 241 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 RARRES3Q9UL19 164 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 PP6455Q8WZ26 134 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 ACY3Q96HD9 319 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 SPOCK3Q9BQ16 436 aa14.65□□□□□ -0.06
PTPRA-205ENST00000399903 MRPL13Q9BYD1 178 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms