RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SSX7Q7RTT5 188 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 MRPL41Q8IXM3 137 aaKnown RBP20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 GPR137CQ8N3F9 429 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM37Q8WXS4 190 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 NUBP1P53384 320 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 C9orf135Q5VTT2 229 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 NCR3LG1Q68D85 454 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 TEX38Q6PEX7 206 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 MYPOPQ86VE0 399 aaPredicted RBP20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 ACY3Q96HD9 319 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 HS3ST6Q96QI5 342 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 OCIAD1Q9NX40 245 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 RNF115Q9Y4L5 304 aa20.57■□□□□ 0.88
CSNK1E-203ENST00000396832 PDLIM4P50479 330 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 CCL7P80098 99 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 CNN3Q15417 329 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 YRDCQ86U90 279 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM18Q96B42 140 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 Q9N2K0 584 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 CHD3Q12873 2000 aaKnown RBP20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 CLEC18AA5D8T8 446 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 FGF5P12034 268 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 VDAC1P21796 283 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 IDH3GP51553 393 aaPredicted RBP20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 MALLQ13021 153 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 IQCJQ1A5X6 159 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 ZNF818PQ6ZRF7 136 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 CLEC18CQ8NCF0 446 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 OR51G1Q8NGK1 321 aa20.56■□□□□ 0.88
CSNK1E-203ENST00000396832 PLA2G5P39877 138 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 ERVFC1-1P60608 527 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM267Q0VDI3 215 aaPredicted RBP20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 SLC23A3Q6PIS1 610 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 GAPTQ8N292 157 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 MBD3L1Q8WWY6 194 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 SMIM7Q9BQ49 75 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 PCGF1Q9BSM1 259 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 NAT8Q9UHE5 227 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 PRSS50Q9UI38 385 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 CCL2P13500 99 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 TCN2P20062 427 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 RBKSQ9H477 322 aa20.55■□□□□ 0.88
CSNK1E-203ENST00000396832 TP53I11O14683 189 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 SYNGR3O43761 229 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 SCTP09683 121 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 CRYGSP22914 178 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 GALR1P47211 349 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 TGIF2LYQ8IUE0 185 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 OR1F12Q8NHA8 337 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 SCGB1C1Q8TD33 95 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM170AQ8WVE7 144 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 PLSCR2Q9NRY7 297 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 IGKV1D-13A0A0B4J2D9 117 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 PDCD6O75340 191 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 IGKV1-13P0DP09 117 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 TDGF1P3P51864 188 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM211Q6ICI0 200 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 MRGPRGQ86SM5 289 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 WDR5BQ86VZ2 330 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 KMT5CQ86Y97 462 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 TDHQ8IZJ6 230 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 ZNF611Q8N823 705 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 NEK7Q8TDX7 302 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 FUT9Q9Y231 359 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 KIAA2026Q5HYC2 2103 aa20.54■□□□□ 0.88
CSNK1E-203ENST00000396832 A0A0G2JMM0 328 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 A0A1W2PPB8 328 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 A0A1W2PRS3 328 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 KIR3DP1A8MWS1 328 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 ZIC3O60481 467 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 MBP02144 154 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 RPS18P62269 152 aaKnown RBP20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 TMEM241Q24JQ0 296 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 ASCL4Q6XD76 172 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 CCDC74BQ96LY2 380 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 TAAR3PQ9P1P4 343 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 SEMA5BQ9P283 1151 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 OR5B12Q96R08 314 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 ESPL1Q14674 2120 aa20.53■□□□□ 0.88
CSNK1E-203ENST00000396832 RAB4AP20338 218 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 OR8B8Q15620 311 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 ELOVL1Q9BW60 279 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 IGHV5-10-1A0A0J9YXX1 117 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 MARCH11A6NNE9 402 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 H7BYZ3 331 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 DKK1O94907 266 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 GNB2P62879 340 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 BSXQ3C1V8 233 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 CARFQ8N187 725 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 CRIM1Q9NZV1 1036 aa20.52■□□□□ 0.88
CSNK1E-203ENST00000396832 A0A1W2PPQ1 181 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 SCGB1D1O95968 90 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 RBM11P57052 281 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 HIST1H3AP68431 136 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 PSG4Q00888 419 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 PRSS8Q16651 343 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 FAM27BQ5VT28 67 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 LHFPL2Q6ZUX7 228 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 R3HDM4Q96D70 268 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 NCKAP5O14513 1909 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms