RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FSTP19883 344 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 YIF1BQ5BJH7 314 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 Q8N6K4 173 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 TMEM104Q8NE00 496 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 RTN4IP1Q8WWV3 396 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-208ENST00000392449 ST6GALNAC6Q969X2 333 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 CKLFQ9UBR5 152 aa13.07□□□□□ -0.32
PTPRK-208ENST00000392449 GPX5O75715 221 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 THBS3P49746 956 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 ZNF134P52741 427 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 EBI3Q14213 229 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 SYT6Q5T7P8 510 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-208ENST00000392449 AWAT2Q6E213 333 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 IZUMO1Q8IYV9 350 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 STPG2Q8N412 459 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 Q8N9W7 124 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 KLHL30-AS1Q8NEE0 82 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 OR52M1Q8NGK5 317 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
PTPRK-208ENST00000392449 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
PTPRK-208ENST00000392449 ETAA1Q9NY74 926 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
PTPRK-208ENST00000392449 TRAPPC2LQ9UL33 140 aa13.06□□□□□ -0.32
PTPRK-208ENST00000392449 ORC5O43913 435 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 ZNF780AO75290 641 aaPredicted RBP13.05□□□□□ -0.32
PTPRK-208ENST00000392449 RCC1P18754 421 aaPredicted RBP13.05□□□□□ -0.32
PTPRK-208ENST00000392449 GPR12P47775 334 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 INSL4Q14641 139 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 TTC23Q5W5X9 447 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 STX19Q8N4C7 294 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 DHRSXQ8N5I4 330 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 LINC00311Q8N616 119 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 ZNF439Q8NDP4 499 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 DERL3Q96Q80 235 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 SELENOIQ9C0D9 397 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
PTPRK-208ENST00000392449 UBE2QL1A1L167 161 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 HBZP02008 142 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 GNMTQ14749 295 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 RCN1Q15293 331 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 DEFB136Q30KP8 78 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 CT45A1Q5HYN5 189 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 DEFB121Q5J5C9 76 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 AHSA2Q719I0 299 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 LYPD6Q86Y78 171 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 TGIF2LXQ8IUE1 241 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 FOXRED2Q8IWF2 684 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 SETD9Q8NE22 299 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 CT45A3Q8NHU0 189 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 FAM46BQ96A09 425 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 HSPB9Q9BQS6 159 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 PLSCR3Q9NRY6 295 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 GNG12Q9UBI6 72 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 DNAH9Q9NYC9 4486 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 CRTAPO75718 401 aaPredicted RBP13.04□□□□□ -0.32
PTPRK-208ENST00000392449 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
PTPRK-208ENST00000392449 MGMTP16455 207 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 CELP19835 753 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 F2RL1P55085 397 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 EGFEM1PQ0D2K5 195 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 GPR176Q14439 515 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 SLC25A48Q6ZT89 311 aaKnown RBP13.04□□□□□ -0.32
PTPRK-208ENST00000392449 C8orf31Q8N9H6 132 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 OR51D1Q8NGF3 324 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 OR2T10Q8NGZ9 312 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 ABCG5Q9H222 651 aa13.04□□□□□ -0.32
PTPRK-208ENST00000392449 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
PTPRK-208ENST00000392449 MOSP00540 346 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 SLC35B1P78383 322 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 MED21Q13503 144 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 FAM27D1Q5T7N8 215 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 Q96M66 194 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 S1PR3Q99500 378 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 P2RX4Q99571 388 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
PTPRK-208ENST00000392449 PSORS1C1Q9UIG5 152 aa13.03□□□□□ -0.32
PTPRK-208ENST00000392449 EFCAB10A6NFE3 127 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 AP4M1O00189 453 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 SPINT2O43291 252 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 IL3RAP26951 378 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 CD1BP29016 333 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 CAPGP40121 348 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 RAB25P57735 213 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 ZNF695Q8IW36 515 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 C8orf59Q8N0T1 100 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-208ENST00000392449 GAPTQ8N292 157 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 BPIFB6Q8NFQ5 453 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 OR52L2PQ8NGH6 319 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 KCNK15Q9H427 330 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 TAF9BQ9HBM6 251 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms