RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	FABP7	O15540	132 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	RCC1	P18754	421 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DEFA1	P59665	94 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DEFA3	P59666	94 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	GNB2	P62879	340 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	RPL31	P62899	125 aa	Known RBP	13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	VAX1	Q5SQQ9	334 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	STEAP1B	Q6NZ63	245 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR5AP2	Q8NGF4	316 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR4A4P	Q8NGN8	299 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	C8orf46	Q8TAG6	207 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MRGPRD	Q8TDS7	321 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CCDC107	Q8WV48	283 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CORO2A	Q92828	525 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	COX4I2	Q96KJ9	171 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DCTN5	Q9BTE1	182 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CABLES2	Q9BTV7	478 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	RAB9B	Q9NP90	201 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KCNIP1	Q9NZI2	227 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	IGHV4-61	A0A0C4DH41	118 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	NAP1L6	A6NFF2	107 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	C12orf77	C9JDV5	145 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CD3D	P04234	171 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	FCER2	P06734	321 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HLA-DMA	P28067	261 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HRH1	P35367	487 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ARPC4	P59998	168 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	SEC61A1	P61619	476 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	MEF2D	Q14814	521 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CHRFAM7A	Q494W8	412 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	RNASE10	Q5GAN6	216 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	KRTAP1-3	Q8IUG1	177 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	OR4C16	Q8NGL9	310 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	OR5H2	Q8NGV7	314 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	H1FX	Q92522	213 aa	Known RBP	13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	C19orf12	Q9NSK7	152 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	TAS2R3	Q9NYW6	316 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	DOCK11	Q5JSL3	2073 aa		13.83	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	TRAV39	A0A0B4J263	110 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ZNF729	A6NN14	1252 aa	Predicted RBP	13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	NPIPB11	E5RHQ5	1161 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	LYRM1	O43325	122 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	RAB3D	O95716	219 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HEXA	P06865	529 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CTXN2	P0C2S0	81 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	GZMH	P20718	246 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	LMO4	P61968	165 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CDK10	Q15131	360 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	TMEM30B	Q3MIR4	351 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ZNF565	Q8N9K5	539 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	GAL3ST2	Q9H3Q3	398 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	TAF9B	Q9HBM6	251 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HRASLS	Q9HDD0	168 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	NECAP2	Q9NVZ3	263 aa		13.82	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	MALRD1	Q5VYJ5	2156 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CENPX	A8MT69	81 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	C15orf65	H3BRN8	121 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	PLA2G10	O15496	165 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	GSTT2	P0CG29	244 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	SSTR5	P35346	364 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ZNF273	Q14593	569 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HERPUD1	Q15011	391 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CD276	Q5ZPR3	534 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	BTN2A1	Q7KYR7	527 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	OVCH2	Q7RTZ1	564 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	FAM185A	Q8N0U4	392 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ARRDC1	Q8N5I2	433 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	DMRTB1	Q96MA1	342 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	ZNF714	Q96N38	554 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	FOXC2	Q99958	501 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	LINC00574	Q9H8X3	128 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	SLC2A8	Q9NY64	477 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CALY	Q9NYX4	217 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	EHF	Q9NZC4	300 aa		13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780		A0A096LNT2	108 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780		A0A1W2PPH5	198 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	C22orf46	C9J442	243 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780		M0QYG6	137 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	SPINT2	O43291	252 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	FOXH1	O75593	365 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	HBZ	P02008	142 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	SCT	P09683	121 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CGB3	P0DN86	165 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CGB7	P0DN87	165 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	USF1	P22415	310 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	OR3A3	P47888	321 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	MZT2B	Q6NZ67	158 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	LY6G5B	Q8NDX9	201 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	OR4D10	Q8NGI6	311 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	KIRREL1	Q96J84	757 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	CSMD2	Q7Z408	3487 aa		13.8	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	PRRC2A	P48634	2157 aa	Known RBP	13.79	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	IGKV1-6	A0A0C4DH72	117 aa		13.79	□□□□□ -0.2
CDK5RAP3-215	ENST00000579780	LINC00854	A0A1B0GVQ3	168 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms