RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ORAI1Q96D31 301 aa12.29□□□□□ -0.44
SNX6-205ENST00000555648 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
SNX6-205ENST00000555648 MRPS28Q9Y2Q9 187 aaKnown RBP12.29□□□□□ -0.44
SNX6-205ENST00000555648 TRBV5-5A0A0J9YX44 114 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 A0A1W2PPK0 400 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 SERPINE3A8MV23 424 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 AIPO00170 330 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 HSD17B6O14756 317 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 PIN1P1O15428 100 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 IGKV1D-33P01593 117 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 IGKV1-33P01594 117 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 SLC35A2P78381 396 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 RCN1Q15293 331 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 FBLN7Q53RD9 439 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 AWAT2Q6E213 333 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 GLIPR1L1Q6UWM5 242 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 GGHQ92820 318 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 MUL1Q969V5 352 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 VCXQ9H320 206 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 NOTCH1P46531 2555 aa12.28□□□□□ -0.44
SNX6-205ENST00000555648 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A18PA6NE21 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A16PA6NEW6 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A20PA6NIJ5 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A12PA8MX19 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A5PA8MXJ8 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 SPINT2O43291 252 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 LALBAP00709 142 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 MAS1P04201 325 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 AMY1AP04745 511 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 AMY2AP04746 511 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A15PP0C7V4 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A13PP0C7W8 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A14PP0C7W9 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FAM90A24PP0C7X0 464 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 IGFBP3P17936 291 aaPredicted RBP12.27□□□□□ -0.45
SNX6-205ENST00000555648 FSTP19883 344 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 CAPGP40121 348 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 SLC35B1P78383 322 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 FOXRED2Q8IWF2 684 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 OR51D1Q8NGF3 324 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 CHPT1Q8WUD6 406 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 THRSPQ92748 146 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 MRPS24Q96EL2 167 aaKnown RBP12.27□□□□□ -0.45
SNX6-205ENST00000555648 OR14A2Q96R54 314 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 CNOT2Q9NZN8 540 aaKnown RBP12.27□□□□□ -0.45
SNX6-205ENST00000555648 ZNF581Q9P0T4 197 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
SNX6-205ENST00000555648 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 A0A1W2PP11 408 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 NCBP2LA6PVI3 153 aaKnown RBP12.26□□□□□ -0.45
SNX6-205ENST00000555648 FGF16O43320 207 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 ORC5O43913 435 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 GPX5O75715 221 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 MT-ND4P03905 459 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 IGLL1P15814 213 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 CELP19835 753 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 MAPK3P27361 379 aaPredicted RBP12.26□□□□□ -0.45
SNX6-205ENST00000555648 REG1BP48304 166 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 LOXL3P58215 753 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 ADARB1P78563 741 aaKnown RBP12.26□□□□□ -0.45
SNX6-205ENST00000555648 DIAPH2-AS1Q14236 149 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 TCTEX1D4Q5JR98 221 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 C6orf183Q5T699 404 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 AHSA2Q719I0 299 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 SLC35E3Q7Z769 313 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 C5orf56Q8N8D9 126 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 WFDC9Q8NEX5 89 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 BPIFB6Q8NFQ5 453 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 PGLYRP3Q96LB9 341 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 ERGIC3Q9Y282 383 aa12.26□□□□□ -0.45
SNX6-205ENST00000555648 IGHV3-43A0A0B4J1X8 118 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 IGHV1-3A0A0C4DH29 117 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 NUDT19A8MXV4 375 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 CRTAPO75718 401 aaPredicted RBP12.25□□□□□ -0.45
SNX6-205ENST00000555648 DUS4LO95620 317 aaKnown RBP12.25□□□□□ -0.45
SNX6-205ENST00000555648 IGHV3-43DP0DP04 118 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 WNT4P56705 351 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 ZNF816Q0VGE8 651 aaPredicted RBP12.25□□□□□ -0.45
SNX6-205ENST00000555648 DOC2BQ14184 412 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 SYT6Q5T7P8 510 aaPredicted RBP12.25□□□□□ -0.45
SNX6-205ENST00000555648 RAB12Q6IQ22 244 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 TRAT1Q6PIZ9 186 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 ZNF497Q6ZNH5 498 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 CDH26Q8IXH8 852 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 PRR18Q8N4B5 295 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 NKAIN3Q8N8D7 197 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 OR2T10Q8NGZ9 312 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 RCC1LQ96I51 464 aaKnown RBP12.25□□□□□ -0.45
SNX6-205ENST00000555648 SELENOIQ9C0D9 397 aa12.25□□□□□ -0.45
SNX6-205ENST00000555648 GFOD1Q9NXC2 390 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms