RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 COX5BP10606 129 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 CCL2P13500 99 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 KITLGP21583 273 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SLC6A1P30531 599 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 S100A3P33764 101 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 DAP3P51398 398 aaKnown RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 FOXA1P55317 472 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 BIDP55957 195 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 CLDN8P56748 225 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ERVS71-1P61550 626 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ARF6P62330 175 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ST3GAL3Q11203 375 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SGCAQ16586 387 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 PABPC1L2AQ5JQF8 200 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 C8orf74Q6P047 294 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 METAP1DQ6UB28 335 aaPredicted RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ZYG11AQ6WRX3 759 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TIFABQ6ZNK6 161 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ZCCHC23Q6ZST2 131 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SLC35D2Q76EJ3 337 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 NUDCD3Q8IVD9 361 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 LRRC18Q8N456 261 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 CLDN22Q8N7P3 220 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 OR8J2Q8NGG1 315 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 OR5J2Q8NH18 312 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TRUB1Q8WWH5 349 aaKnown RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 FCGR1BQ92637 280 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TMEM54Q969K7 222 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TSPAN32Q96QS1 320 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 RBP7Q96R05 134 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ZBTB18Q99592 522 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SDHCQ99643 169 aaPredicted RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SLC35A5Q9BS91 424 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TMEM43Q9BTV4 400 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SLC22A4Q9H015 551 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 SLC38A1Q9H2H9 487 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ROPN1Q9HAT0 212 aaPredicted RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TMEM100Q9NV29 134 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TMEM216Q9P0N5 145 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 RIMS3Q9UJD0 308 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 RPUSD1Q9UJJ7 312 aaKnown RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 RABL2BQ9UNT1 228 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF443Q9Y2A4 671 aaPredicted RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 FIS1Q9Y3D6 152 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 MAB21L2Q9Y586 359 aa2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TSSC4Q9Y5U2 329 aaPredicted RBP2.37□□□□□ -2.03
PABPC1-206ENST00000518293 TCRBV4S1A1TA0A5B7 111 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 H3BUX3 64 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 HMGN4O00479 90 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 PLPP3O14495 311 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 COPEO14579 308 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 POLR3GO15318 223 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 NDUFB3O43676 98 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SSX5O60225 188 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 BCAS1O75363 584 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 CYB5R3P00387 301 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 CST2P09228 141 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ANXA3P12429 323 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 H2AFXP16104 143 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 FUT1P19526 365 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 RPS4Y1P22090 263 aaKnown RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SERPINB5P36952 375 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 MPV17P39210 176 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 NAA10P41227 235 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ACAA2P42765 397 aaKnown RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 VDAC2P45880 294 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 UBE2E1P51965 193 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 GNG11P61952 73 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 EMX2Q04743 252 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SCRN3Q0VDG4 424 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ECH1Q13011 328 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR8B8Q15620 311 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SYPL1Q16563 259 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 LRRC75BQ2VPJ9 315 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 LRRC10Q5BKY1 277 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 PHYHD1Q5SRE7 291 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 FAM27BQ5VT28 67 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR4F3Q6IEY1 312 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR8G2PQ6IF36 304 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 TTC33Q6PID6 262 aaPredicted RBP2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF836Q6ZNA1 936 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF621Q6ZSS3 439 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SLC36A1Q7Z2H8 476 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 NANOGNBQ7Z5D8 188 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 VMO1Q7Z5L0 202 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 RIMKLAQ8IXN7 391 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 MKXQ8IYA7 352 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ANKFN1Q8N957 763 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 CCDC71LQ8N9Z2 235 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR8G5Q8NG78 346 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 OR5D13Q8NGL4 314 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 TWIST2Q8WVJ9 160 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 TESCQ96BS2 214 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 RASD2Q96D21 266 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 CMBLQ96DG6 245 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 SLC41A3Q96GZ6 507 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 AKR1E2Q96JD6 320 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 PANX1Q96RD7 426 aa2.36□□□□□ -2.03
PABPC1-206ENST00000518293 ZNF607Q96SK3 696 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms