RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 MMP9P14780 707 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 HIST1H1DP16402 221 aaKnown RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TNFRSF1BP20333 461 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 NTSP30990 170 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SFTPDP35247 375 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUSP3P51452 185 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 RHOBP62745 196 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 RPL32P62910 135 aaKnown RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ARG2P78540 354 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 PSG9Q00887 426 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MFGE8Q08431 387 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 P2RY6Q15077 328 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 GABRA6Q16445 453 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TDRG1Q3Y452 100 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CTXN3Q4LDR2 81 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT83Q5H943 113 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM27D1Q5T7N8 215 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM42Q69YG0 159 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRAT1Q6PIZ9 186 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 AGTRAPQ6RW13 159 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 Q7L0L9 218 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ERASQ7Z444 233 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRP11Q86VZ4 500 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CXorf67Q86X51 503 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 HOGA1Q86XE5 327 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 C1orf210Q8IVY1 113 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4N5Q8IXE1 308 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 BOD1L2Q8IYS8 172 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SIRT6Q8N6T7 355 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CYB561D1Q8N8Q1 229 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZIC4Q8N9L1 334 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 B3GALNT2Q8NCR0 500 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MORN4Q8NDC4 146 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2K2Q8NGT1 345 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2G3Q8NGZ4 309 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLDND2Q8NHS1 167 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPTC7Q8NI37 304 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF563Q8TA94 476 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MARCH1Q8TCQ1 289 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC38A5Q8WUX1 472 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5P2Q8WZ92 322 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 EMG1Q92979 244 aaKnown RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 GLYATL1Q969I3 302 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM45BQ96B21 275 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZG16BQ96DA0 208 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 NEURL3Q96EH8 262 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPHA2Q96T91 129 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 RARRES2Q99969 163 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 RTBDNQ9BSG5 229 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TPSD1Q9BZJ3 242 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 STRADBQ9C0K7 418 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 GTSF1LQ9H1H1 148 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MS4A6AQ9H2W1 248 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 UBE2ZQ9H832 354 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 BCL2L10Q9HD36 194 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ARL15Q9NXU5 204 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 EHFQ9NZC4 300 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 MARCH4Q9P2E8 410 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 C11orf21Q9P2W6 132 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CKLFQ9UBR5 152 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 CCNL1Q9UK58 526 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 HSF4Q9ULV5 492 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 DAPP1Q9UN19 280 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 VSIG4Q9Y279 399 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC17A4Q9Y2C5 497 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 WASHC3Q9Y3C0 194 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 ROBO1Q9Y6N7 1651 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRPM7Q96QT4 1865 aa4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 NYNRINQ9P2P1 1898 aaKnown RBP4.15□□□□□ -1.75
HMGB1P19-201ENST00000517578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRP5LA4QPB2 252 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 NPIPB15A6NHN6 443 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 MSGN1A6NI15 193 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM212A6NML5 194 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 H0Y980 276 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 K7EP34 96 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 KIR2DS3K7RE56 304 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 M0R2Z0 102 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 DEGS1O15121 323 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 ST8SIA3O43173 380 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUSP11O75319 330 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CLDN1O95832 211 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CATP04040 527 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPX1P07203 203 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 LINC00869P0C866 280 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 BCL2P10415 239 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 IRF1P10914 325 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 PGCP20142 388 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 PSMB5P28074 263 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CCR2P41597 374 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 TSFMP43897 325 aaKnown RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 FASLGP48023 281 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 SOX2P48431 317 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 AMTP48728 403 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 KRTDAPP60985 99 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 CDC42EP1Q00587 391 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 B4GALNT1Q00973 533 aa4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 MEF2BQ02080 365 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P19-201ENST00000517578 HHEXQ03014 270 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms