RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TTPAP49638 278 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 RAP1GDS1P52306 607 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 IFFO1Q0D2I5 559 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 SKP2Q13309 424 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 RAB11BQ15907 218 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 FAM229BQ4G0N7 80 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 AGTRAPQ6RW13 159 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 SSX7Q7RTT5 188 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 GAPTQ8N292 157 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 GPX8Q8TED1 209 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 NAP1L5Q96NT1 182 aaPredicted RBP0.18□□□□□ -2.38
CCDC93-209ENST00000488908 VAT1Q99536 393 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 APOL4Q9BPW4 351 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 MND1Q9BWT6 205 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 PECRQ9BY49 303 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 NXF2Q9GZY0 626 aaKnown RBP0.18□□□□□ -2.38
CCDC93-209ENST00000488908 ALX4Q9H161 411 aaPredicted RBP0.18□□□□□ -2.38
CCDC93-209ENST00000488908 POMKQ9H5K3 350 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 ARAP3Q8WWN8 1544 aa0.18□□□□□ -2.38
CCDC93-209ENST00000488908 IGHV3-73A0A0B4J1V6 119 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 DHRS12A0PJE2 317 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 SUPT3HB4E1H0 165 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 H3BP45 60 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 H3BPC8 53 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 LTAP01374 205 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 IGHV3-30-3P0DP02 117 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ATF1P18846 271 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 M6PRP20645 277 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 PYCR1P32322 319 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 GCLMP48507 274 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 INPP1P49441 399 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 PLTPP55058 493 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ZNF90Q03938 601 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 PSG3Q16557 428 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ZNF791Q3KP31 576 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 C2orf91Q6ZV80 131 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 OLIG3Q7RTU3 272 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 TRIML2Q8N7C3 387 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ASCC1Q8N9N2 400 aaKnown RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 DRAXINQ8NBI3 349 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 DTD1Q8TEA8 209 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 NELFBQ8WX92 580 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 TFGQ92734 400 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 CERS2Q96G23 380 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 CENPNQ96H22 339 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 BIRC8Q96P09 236 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 PITX2Q99697 317 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 FAAP24Q9BTP7 215 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ZNF471Q9BX82 626 aaPredicted RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 XKR8Q9H6D3 395 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 C8orf4Q9NR00 106 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 MED9Q9NWA0 146 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ZMAT5Q9UDW3 170 aaKnown RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 POMPQ9Y244 141 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 ANGPT4Q9Y264 503 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 MTCH2Q9Y6C9 303 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 DISP1Q96F81 1524 aa0.17□□□□□ -2.38
CCDC93-209ENST00000488908 DIDO1Q9BTC0 2240 aaKnown RBP0.17□□□□□ -2.38
CCDC93-209ENST00000488908 TRAV8-7A0A075B6U6 113 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 MEIKINA0A087WXM9 373 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 A0A1B0GVG6 124 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 GRIFINA4D1Z8 144 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 TMEM235A6NFC5 223 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 C2orf74A8MZ97 194 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 I3L4J1 428 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 UBFD1O14562 309 aaKnown RBP0.16□□□□□ -2.38
CCDC93-209ENST00000488908 ZW10O43264 779 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 SOD1P00441 154 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 FBP1P09467 338 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 CPN2P22792 545 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 HSPA13P48723 471 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 DSTNP60981 165 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 RHOAP61586 193 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 CTAG1AP78358 180 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 ERHP84090 104 aaKnown RBP0.16□□□□□ -2.38
CCDC93-209ENST00000488908 LRRC74AQ0VAA2 488 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 DYNC1I2Q13409 638 aaKnown RBP0.16□□□□□ -2.38
CCDC93-209ENST00000488908 TAL2Q16559 108 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 PABPC1L2AQ5JQF8 200 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 GLT6D1Q7Z4J2 308 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 SLC35F6Q8N357 371 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 FAM184AQ8NB25 1140 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 OR8B12Q8NGG6 310 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 OR10A6Q8NH74 314 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 SLC35G5Q96KT7 338 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 MGLLQ99685 303 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 ZNF426Q9BUY5 554 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 SUCNR1Q9BXA5 334 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 CDCA4Q9BXL8 241 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 C8orf33Q9H7E9 229 aaPredicted RBP0.16□□□□□ -2.38
CCDC93-209ENST00000488908 IFNKQ9P0W0 207 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 SCML1Q9UN30 329 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 FIS1Q9Y3D6 152 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 ALG5Q9Y673 324 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 USH1CQ9Y6N9 552 aa0.16□□□□□ -2.38
CCDC93-209ENST00000488908 ADAMTSL3P82987 1691 aa0.15□□□□□ -2.39
CCDC93-209ENST00000488908 TRBV6-5A0A0K0K1A5 114 aa0.15□□□□□ -2.39
CCDC93-209ENST00000488908 A8MUN3 132 aa0.15□□□□□ -2.39
CCDC93-209ENST00000488908 PRMT5O14744 637 aaPredicted RBP0.15□□□□□ -2.39
CCDC93-209ENST00000488908 GNRH2O43555 120 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms