RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 ZNF146Q15072 292 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 ZNF497Q6ZNH5 498 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 H1FOOQ8IZA3 346 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 OR4D5Q8NGN0 318 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 MBD3L2Q8NHZ7 208 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 CABLES2Q9BTV7 478 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 LUZP4Q9P127 313 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 OR1A1Q9P1Q5 309 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 NSG2Q9Y328 171 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 OR2W1Q9Y3N9 320 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 RP1L1Q8IWN7 2480 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 KLK10O43240 276 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 IGLV1-44P01699 117 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 SRPXP78539 464 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 Q6ZR03 302 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 Q6ZS92 163 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 ZNF695Q8IW36 515 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 C11orf53Q8IXP5 236 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 PRR18Q8N4B5 295 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 TREM2Q9NZC2 230 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 ERRFI1Q9UJM3 462 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 BSNQ9UPA5 3926 aa11□□□□□ -0.65
SEC13-216ENST00000479868 MAP1BP46821 2468 aaKnown RBP11□□□□□ -0.65
SEC13-216ENST00000479868 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
SEC13-216ENST00000479868 IGHV1-18A0A0C4DH31 117 aa11□□□□□ -0.65
SEC13-216ENST00000479868 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
SEC13-216ENST00000479868 TMEM210A6NLX4 147 aa11□□□□□ -0.65
SEC13-216ENST00000479868 WNT9BO14905 357 aa11□□□□□ -0.65
SEC13-216ENST00000479868 ST8SIA3O43173 380 aa11□□□□□ -0.65
SEC13-216ENST00000479868 CDS2O95674 445 aa11□□□□□ -0.65
SEC13-216ENST00000479868 HOXD4P09016 255 aaPredicted RBP11□□□□□ -0.65
SEC13-216ENST00000479868 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
SEC13-216ENST00000479868 FABP6P51161 128 aa11□□□□□ -0.65
SEC13-216ENST00000479868 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
SEC13-216ENST00000479868 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
SEC13-216ENST00000479868 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
SEC13-216ENST00000479868 UBALD1Q8TB05 177 aa11□□□□□ -0.65
SEC13-216ENST00000479868 MARC2Q969Z3 335 aa11□□□□□ -0.65
SEC13-216ENST00000479868 PIGMQ9H3S5 423 aa11□□□□□ -0.65
SEC13-216ENST00000479868 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
SEC13-216ENST00000479868 RCL1Q9Y2P8 373 aaKnown RBP11□□□□□ -0.65
SEC13-216ENST00000479868 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
SEC13-216ENST00000479868 CADP27708 2225 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 DMXL2Q8TDJ6 3036 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 SH2D1BO14796 132 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 PGLYRP1O75594 196 aaPredicted RBP10.99□□□□□ -0.65
SEC13-216ENST00000479868 M6PRP20645 277 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 UCP1P25874 307 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 P2RY6Q15077 328 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 CMTM1Q8IZ96 169 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 RBMXL3Q8N7X1 1067 aaKnown RBP10.99□□□□□ -0.65
SEC13-216ENST00000479868 HES4Q9HCC6 221 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 MSL2Q9HCI7 577 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 TRAPPC2LQ9UL33 140 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 FAM215AQ9Y5M1 114 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 OR5H1A6NKK0 313 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 ZNF705EA8MWA4 302 aaPredicted RBP10.99□□□□□ -0.65
SEC13-216ENST00000479868 TIMM8AO60220 97 aaPredicted RBP10.99□□□□□ -0.65
SEC13-216ENST00000479868 FBXO24O75426 580 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 PRAMEF6Q5VXH4 476 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 LPAR3Q9UBY5 353 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 POMT1Q9Y6A1 747 aa10.99□□□□□ -0.65
SEC13-216ENST00000479868 CHD3Q12873 2000 aaKnown RBP10.99□□□□□ -0.65
SEC13-216ENST00000479868 NBEAQ8NFP9 2946 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 B8ZZF3 427 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 ADAM20O43506 726 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 PSPNO60542 156 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 HAND1O96004 215 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 GAPDHP04406 335 aaKnown RBP10.98□□□□□ -0.65
SEC13-216ENST00000479868 KITLGP21583 273 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 AKR1C2P52895 323 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 EIF5AP63241 154 aaKnown RBP10.98□□□□□ -0.65
SEC13-216ENST00000479868 AKR1C1Q04828 323 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 MOB1BQ7L9L4 216 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 BCL2L14Q9BZR8 327 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.98□□□□□ -0.65
SEC13-216ENST00000479868 LOC105371267A0A1B0GV96 52 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 NPIPB11E5RHQ5 1161 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 JTBO76095 146 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 IGLV2-14P01704 120 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 APOC3P02656 99 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 F2RP25116 425 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 P2RY1P47900 373 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 TESK1Q15569 626 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 BEND4Q6ZU67 534 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 NARS2Q96I59 477 aaKnown RBP10.98□□□□□ -0.65
SEC13-216ENST00000479868 PARP12Q9H0J9 701 aaKnown RBP10.98□□□□□ -0.65
SEC13-216ENST00000479868 CXXC4Q9H2H0 198 aa10.98□□□□□ -0.65
SEC13-216ENST00000479868 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms