RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IGHV1-46P01743 117 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 AADACP22760 399 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 KCNRGQ8N5I3 272 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 PHB2Q99623 299 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 PDCD10Q9BUL8 212 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 RIMS4Q9H426 269 aaPredicted RBP17.76■□□□□ 0.43
PTPRF-207ENST00000436724 C14orf166Q9Y224 244 aaKnown RBP17.76■□□□□ 0.43
PTPRF-207ENST00000436724 A8MXK9 166 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 RPS2P15880 293 aaKnown RBP17.76■□□□□ 0.43
PTPRF-207ENST00000436724 ZP3P21754 424 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 GLP1RP43220 463 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 SRSF7Q16629 238 aaKnown RBP eCLIP17.76■□□□□ 0.435e-7■■■□□ 16.8
PTPRF-207ENST00000436724 ZNF497Q6ZNH5 498 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 ZCCHC24Q8N2G6 241 aaKnown RBP17.76■□□□□ 0.43
PTPRF-207ENST00000436724 GCSAMQ8N6F7 178 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 PPP1R1CQ8WVI7 109 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 TREM2Q9NZC2 230 aa17.76■□□□□ 0.43
PTPRF-207ENST00000436724 LOC105371267A0A1B0GV96 52 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 TEX46H3BTG2 121 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 TUSC1Q2TAM9 212 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 SMIM21Q3B7S5 101 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 LRRC37A5PQ49AS3 106 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 PDZD9Q8IXQ8 264 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 GALNT11Q8NCW6 608 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 UBALD1Q8TB05 177 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 ST8SIA2Q92186 375 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 NEUROG1Q92886 237 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 PLPPR2Q96GM1 343 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 PFDN2Q9UHV9 154 aa17.75■□□□□ 0.43
PTPRF-207ENST00000436724 TRBV6-6A0A0A6YYG2 114 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 KIR2DS1A0A191URI9 304 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 TMEM8BA6NDV4 472 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 SFT2D2O95562 160 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 ZNF728P0DKX0 622 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 KIR2DS4P43632 304 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 KIR2DS1Q14954 304 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 ZNF880Q6PDB4 577 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 SSX8Q7RTT4 187 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 COMMD9Q9P000 198 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 HIVEP3Q5T1R4 2406 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 ANKHD1Q8IWZ3 2542 aaKnown RBP17.74■□□□□ 0.43
PTPRF-207ENST00000436724 SRRM5B3KS81 715 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 LGALS8O00214 317 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 PPYP01298 95 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 CTSDP07339 412 aaPredicted RBP17.74■□□□□ 0.43
PTPRF-207ENST00000436724 FGF2P09038 288 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 TNFAIP6P98066 277 aaPredicted RBP17.74■□□□□ 0.43
PTPRF-207ENST00000436724 ANKRD55Q3KP44 614 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 FAM201AQ5SY85 155 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 PRR18Q8N4B5 295 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 CA5BP1Q8WTZ4 195 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 RNASE6Q93091 150 aaKnown RBP17.74■□□□□ 0.43
PTPRF-207ENST00000436724 MOB3AQ96BX8 217 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 NGBQ9NPG2 151 aa17.74■□□□□ 0.43
PTPRF-207ENST00000436724 IGHV3OR15-7A0A075B7D8 119 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 RNF222A6NCQ9 220 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 OR2F2O95006 317 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 LMO1P25800 156 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 MDH2P40926 338 aaKnown RBP17.73■□□□□ 0.43
PTPRF-207ENST00000436724 ECI1P42126 302 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 UBA52P62987 128 aaKnown RBP17.73■□□□□ 0.43
PTPRF-207ENST00000436724 OR2F1Q13607 317 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 ZNF345Q14585 488 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 FBXL19-AS1Q494R0 122 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 DMRTC2Q8IXT2 367 aaPredicted RBP17.73■□□□□ 0.43
PTPRF-207ENST00000436724 CD177Q8N6Q3 437 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 KIRREL1Q96J84 757 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 ESRP2Q9H6T0 727 aaKnown RBP17.73■□□□□ 0.43
PTPRF-207ENST00000436724 GLS2Q9UI32 602 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 TRAPPC2LQ9UL33 140 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 SHISA9B4DS77 424 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 TK1P04183 234 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 PIGPP57054 158 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 COL10A1Q03692 680 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 PHLDA2Q53GA4 152 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 NCMAPQ5T1S8 102 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 SHEQ5VZ18 495 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 TGIF2LYQ8IUE0 185 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 IL1F10Q8WWZ1 152 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 VRK1Q99986 396 aaPredicted RBP17.73■□□□□ 0.43
PTPRF-207ENST00000436724 GCM1Q9NP62 436 aa17.73■□□□□ 0.43
PTPRF-207ENST00000436724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.72■□□□□ 0.43
PTPRF-207ENST00000436724 DBX1A6NMT0 343 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 FAM25EA8MYX2 175 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 HERV-K104P61576 105 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 HLA-DRB3P79483 266 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 AESQ08117 197 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 BEX5Q5H9J7 111 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 BVESQ8NE79 360 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 OR11L1Q8NGX0 322 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 SLC25A32Q9H2D1 315 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 PSG2P11465 335 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 NUP62P37198 522 aaPredicted RBP17.72■□□□□ 0.43
PTPRF-207ENST00000436724 CCL8P80075 99 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 ACOT7LQ6ZUV0 252 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 HSD17B13Q7Z5P4 300 aaPredicted RBP17.72■□□□□ 0.43
PTPRF-207ENST00000436724 GAPTQ8N292 157 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 PRR7Q8TB68 274 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 IL19Q9UHD0 177 aa17.72■□□□□ 0.43
PTPRF-207ENST00000436724 SESN1Q9Y6P5 492 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms