RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
CDCA3-202ENST00000422785 POMT1Q9Y6A1 747 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 NKX2-6A6NCS4 301 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-202ENST00000422785 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-202ENST00000422785 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-202ENST00000422785 SH2D1BO14796 132 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 GPR137BO60478 399 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 IGLV1-44P01699 117 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 GRPP07492 148 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 CECR9P0C854 216 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 UCP1P25874 307 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 BPIFCQ8NFQ6 507 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-202ENST00000422785 ARL11Q969Q4 196 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 TINAGQ9UJW2 476 aa11.68□□□□□ -0.54
CDCA3-202ENST00000422785 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 ZNF705EA8MWA4 302 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 PLPPR1Q8TBJ4 325 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 ERGIC1Q969X5 290 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 SPIN2AQ99865 258 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 SPIN2BQ9BPZ2 258 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 BCL2L14Q9BZR8 327 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 H0Y980 276 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 MLNRO43193 412 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 PGLYRP1O75594 196 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 KITLGP21583 273 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 S100GP29377 79 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 NBL1P41271 181 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 OPN3Q9H1Y3 402 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 DMXL1Q9Y485 3027 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 NUPL2O15504 423 aaKnown RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 GNMTQ14749 295 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 MST1LQ2TV78 715 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 FIP1L1Q6UN15 594 aaKnown RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 BHLHA15Q7RTS1 189 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 IL22RA2Q969J5 263 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 SMIM3Q9BZL3 60 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 ERRFI1Q9UJM3 462 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
CDCA3-202ENST00000422785 RCL1Q9Y2P8 373 aaKnown RBP11.67□□□□□ -0.54
CDCA3-202ENST00000422785 CLEC18AA5D8T8 446 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 SULT1A2P50226 295 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 Q6ZS92 163 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 FAM169BQ8N8A8 192 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 CXXC4Q9H2H0 198 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 TRAPPC2LQ9UL33 140 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 IGHV3-64DA0A0J9YX35 117 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 OR5H1A6NKK0 313 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-202ENST00000422785 APOC3P02656 99 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 VDAC1P21796 283 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 F2RP25116 425 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 C11orf53Q8IXP5 236 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 C1orf174Q8IYL3 243 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 ABHD14BQ96IU4 210 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
CDCA3-202ENST00000422785 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 MBNL3Q9NUK0 354 aaKnown RBP11.66□□□□□ -0.54
CDCA3-202ENST00000422785 TAAR3PQ9P1P4 343 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 OR1A1Q9P1Q5 309 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 WIPI2Q9Y4P8 454 aa11.66□□□□□ -0.54
CDCA3-202ENST00000422785 IGHV2OR16-5A0A0B4J2B6 119 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 IGHV1-18A0A0C4DH31 117 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 HAND1O96004 215 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 WNT2P09544 360 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 IL34Q6ZMJ4 242 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 BSCL2Q96G97 398 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 TLNRD1Q9H1K6 362 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 ASPMQ8IZT6 3477 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 INTS1Q8N201 2190 aaKnown RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 ADAM20O43506 726 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 NKX2-1P43699 371 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 MBNL2Q5VZF2 373 aaKnown RBP11.65□□□□□ -0.54
CDCA3-202ENST00000422785 CLEC9AQ6UXN8 241 aa11.65□□□□□ -0.54
CDCA3-202ENST00000422785 FRYQ5TBA9 3013 aa11.64□□□□□ -0.55
CDCA3-202ENST00000422785 BORCS7-ASMTA0A0B4J1R7 106 aa11.64□□□□□ -0.55
CDCA3-202ENST00000422785 TRAV39A0A0B4J263 110 aa11.64□□□□□ -0.55
CDCA3-202ENST00000422785 TNFSF12O43508 249 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms