RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SULT1A1P50225 295 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 CCDC71LQ8N9Z2 235 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 SUMF1Q8NBK3 374 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 UMAD1C9J7I0 102 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 HSD17B6O14756 317 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 ASCL1P50553 236 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 UCP3P55916 312 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 ZNF818PQ6ZRF7 136 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 BCL2L2Q92843 193 aaPredicted RBP20.28■□□□□ 0.84
PABPN1-202ENST00000397276 FAM86C1Q9NVL1 165 aa20.28■□□□□ 0.84
PABPN1-202ENST00000397276 DMXL1Q9Y485 3027 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 IGKV1D-13A0A0B4J2D9 117 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 TNFSF12O43508 249 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 IGKV1-13P0DP09 117 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 P4HA3Q7Z4N8 544 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 DPPA2Q7Z7J5 298 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 TBC1D26Q86UD7 250 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 SUMF2Q8NBJ7 301 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 BOD1L1Q8NFC6 3051 aa20.27■□□□□ 0.84
PABPN1-202ENST00000397276 H7C1Q1 480 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 YIF1AO95070 293 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 NAPSAO96009 420 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 CDPF1Q6NVV7 123 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 GAPTQ8N292 157 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 ZNF565Q8N9K5 539 aa20.27■□□□□ 0.83
PABPN1-202ENST00000397276 UBE2J1Q9Y385 318 aaPredicted RBP20.27■□□□□ 0.83
PABPN1-202ENST00000397276 SAXO1Q8IYX7 474 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 RCL1Q9Y2P8 373 aaKnown RBP20.26■□□□□ 0.83
PABPN1-202ENST00000397276 DSPP15924 2871 aaKnown RBP20.26■□□□□ 0.83
PABPN1-202ENST00000397276 E5RGE8 158 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 PPIHO43447 177 aaKnown RBP20.26■□□□□ 0.83
PABPN1-202ENST00000397276 LYZL6O75951 148 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 S100PP25815 95 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 ERVS71-1P61550 626 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 C9orf152Q5JTZ5 239 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 NSG2Q9Y328 171 aa20.26■□□□□ 0.83
PABPN1-202ENST00000397276 TRAV39A0A0B4J263 110 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 IGKV1-6A0A0C4DH72 117 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A10PA6NDY2 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A18PA6NE21 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A16PA6NEW6 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A20PA6NIJ5 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A8PA6NJQ4 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A7PA6NKC0 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A22PA8MWA6 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A12PA8MX19 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A5PA8MXJ8 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A23PA8MXZ1 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 SLC33A1O00400 549 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A15PP0C7V4 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A13PP0C7W8 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A14PP0C7W9 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 FAM90A24PP0C7X0 464 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 EIF2S3P41091 472 aaKnown RBP20.25■□□□□ 0.83
PABPN1-202ENST00000397276 LRTM2Q8N967 370 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 DEFB124Q8NES8 71 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 POMT1Q9Y6A1 747 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 SPAARA0A1B0GVQ0 90 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 NKX2-6A6NCS4 301 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 PMELP40967 661 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 CAMLGP49069 296 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 IDH3GP51553 393 aaPredicted RBP20.25■□□□□ 0.83
PABPN1-202ENST00000397276 SOX8P57073 446 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 GNG3P63215 75 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 NHLH2Q02577 135 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 ZNF600Q6ZNG1 722 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 TMEM178AQ8NBL3 297 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 CCL28Q9NRJ3 127 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 ZDHHC8Q9ULC8 765 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 ARHGAP21Q5T5U3 1957 aa20.25■□□□□ 0.83
PABPN1-202ENST00000397276 AP4M1O00189 453 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 NXPH3O95157 252 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 GAPDHP04406 335 aaKnown RBP20.24■□□□□ 0.83
PABPN1-202ENST00000397276 MPV17LQ2QL34 196 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 HSD17B11Q8NBQ5 300 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 PLSCR2Q9NRY7 297 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 FAM212BQ9NTI7 297 aaPredicted RBP20.24■□□□□ 0.83
PABPN1-202ENST00000397276 PPP1CCP36873 323 aaKnown RBP20.24■□□□□ 0.83
PABPN1-202ENST00000397276 ZNF573Q86YE8 665 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 FAM58AQ8N1B3 248 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 RARRES2Q99969 163 aa20.24■□□□□ 0.83
PABPN1-202ENST00000397276 PRH1P02810 166 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 DANCRP0C864 163 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 TNFSF10P50591 281 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 ZNF695Q8IW36 515 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 PRR18Q8N4B5 295 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 UBAC2Q8NBM4 344 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 OR2J1Q9GZK6 312 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 PLEKHA2Q9HB19 425 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 PUS1Q9Y606 427 aaKnown RBP eCLIP20.23■□□□□ 0.83
PABPN1-202ENST00000397276 TRDCB7Z8K6 153 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 ST8SIA3O43173 380 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 FDCSPQ8NFU4 85 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 UBALD1Q8TB05 177 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 TCTEX1D2Q8WW35 142 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 IL1F10Q8WWZ1 152 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 NANOS1Q8WY41 292 aaKnown RBP20.23■□□□□ 0.83
PABPN1-202ENST00000397276 GGACTQ9BVM4 153 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 MPC1Q9Y5U8 109 aa20.23■□□□□ 0.83
PABPN1-202ENST00000397276 ESPL1Q14674 2120 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms