RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MAP2K3P46734 347 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 METTL11BQ5VVY1 283 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CARD17Q5XLA6 110 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF561Q8N587 486 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OR51T1Q8NGJ9 327 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM190Q8WZ59 177 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CHST5Q9GZS9 411 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 KCNS2Q9ULS6 477 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 UBE2J1Q9Y385 318 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 J3QLW9 94 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF19P17023 458 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 PPIAP62937 165 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM69Q5SWH9 247 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 AGAP7PQ5VUJ5 663 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CCBE1Q6UXH8 406 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TRAPPC6BQ86SZ2 158 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CCDC28AQ8IWP9 274 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 IQCF2Q8IXL9 164 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 FAM185AQ8N0U4 392 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 AGAP4Q96P64 663 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF442Q9H7R0 627 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OPN4Q9UHM6 478 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 RNF115Q9Y4L5 304 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 A3GALT2U3KPV4 340 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 IGKV1OR2-108A0A075B7D4 117 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 KIR2DS1A0A191URI9 304 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 FAM230AA0A1W2PPH8 454 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 LINC00473A8K010 186 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CNOT4O95628 575 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 APOA2P02652 100 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 KIR2DS4P43632 304 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 F2RL1P55085 397 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 KIR2DS1Q14954 304 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 PLGLAQ15195 96 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TBRG1Q3YBR2 411 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 RBMS3Q6XE24 437 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 MOB1BQ7L9L4 216 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OR10K1Q8NGX5 313 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ELMOD3Q96FG2 381 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 GCM1Q9NP62 436 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 RNF150Q9ULK6 438 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OSGIN2Q9Y236 505 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 AMDHD2Q9Y303 409 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 A0A0A6YYH2 397 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 A6NJ64 397 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 AIPO00170 330 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 SPINT2O43291 252 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 NOS1APO75052 506 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 YIF1AO95070 293 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ORM1P02763 201 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 S100A2P29034 98 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 S100A12P80511 92 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 RNASE10Q5GAN6 216 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 FAM57AQ8TBR7 257 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 CMTM3Q96MX0 182 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM246Q9BRR3 403 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TPPPO94811 219 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 UBL3O95164 117 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 IL1AP01583 271 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 AKAIN1P0CW23 69 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TAS2R30P59541 319 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 FBXW9Q5XUX1 488 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 THNSL2Q86YJ6 484 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 KLF14Q8TD94 323 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ABHD5Q8WTS1 349 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 MAFIPQ8WZ33 124 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TINAGL1Q9GZM7 467 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 SCPEP1Q9HB40 452 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 PROCRQ9UNN8 238 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ANKRD20A5PA0PJZ0 165 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 SPRY1O43609 319 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 PTTG1O95997 202 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 MYOD1P15172 320 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 RAB13P51153 203 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TAS2R19P59542 299 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ARL16Q0P5N6 197 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 EIF2B1Q14232 305 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 UBE2NLQ5JXB2 153 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 MRPL30Q8TCC3 161 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TSNAXQ99598 290 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 CAMK2AQ9UQM7 478 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 TRAV17A0A0B4J275 112 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 LINC01548A6NM66 108 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF736B4DX44 427 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 M0R233 179 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 GEMIN2O14893 280 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 UPK1BO75841 260 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 RAB3BP20337 219 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 PSMB1P20618 241 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 DTYMKP23919 212 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 IZUMO4Q1ZYL8 232 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 CCDC58Q4VC31 144 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 PVRIGQ6DKI7 326 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 NLRC3Q7RTR2 1065 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 ZCCHC14Q8WYQ9 949 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 CPNE4Q96A23 557 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 PIK3IP1Q96FE7 263 aa4.61□□□□□ -1.67
TOPBP1-201ENST00000260810 AP1S3Q96PC3 154 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms