RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TRAV20A0A0B4J274 112 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 MGST3O14880 152 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 CD5LO43866 347 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 CSF1P09603 554 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 RSBN1Q5VWQ0 802 aaPredicted RBP17.11■□□□□ 0.33
RTCA-201ENST00000260563 HOGA1Q86XE5 327 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 GAPTQ8N292 157 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 TMEM186Q96B77 213 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 ST6GALNAC5Q9BVH7 336 aa17.11■□□□□ 0.33
RTCA-201ENST00000260563 WNK2Q9Y3S1 2297 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 LINC00854A0A1B0GVQ3 168 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 ANKRD20A5PA0PJZ0 165 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 TMEM30CPA0ZSE6 113 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 C22orf46C9J442 243 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 DVL1P1P54792 670 aaPredicted RBP17.1■□□□□ 0.33
RTCA-201ENST00000260563 AP3S2P59780 193 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 PAX5Q02548 391 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 KRTAP1-1Q07627 177 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 AESQ08117 197 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 KLF9Q13886 244 aaPredicted RBP17.1■□□□□ 0.33
RTCA-201ENST00000260563 EDDM3AQ14507 147 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 KRBOX4Q5JUW0 171 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 SLC35E4Q6ICL7 350 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 SETD6Q8TBK2 473 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 MAFIPQ8WZ33 124 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 COQ2Q96H96 371 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 DCTN5Q9BTE1 182 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 HIF1ANQ9NWT6 349 aa17.1■□□□□ 0.33
RTCA-201ENST00000260563 ZNF107Q9UII5 783 aaPredicted RBP17.1■□□□□ 0.33
RTCA-201ENST00000260563 F8P00451 2351 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 TRBV6-6A0A0A6YYG2 114 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 IGHV2-70DA0A0C4DH43 119 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 POM121CA8CG34 1229 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 ENSAO43768 121 aaKnown RBP17.09■□□□□ 0.33
RTCA-201ENST00000260563 MT-ND4P03905 459 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 NAT1P18440 290 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 EDDM3BP56851 147 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 TAS2R19P59542 299 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 BTNL3Q6UXE8 466 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 Q6ZPA2 131 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 TMEM229BQ8NBD8 167 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 OR4K15Q8NH41 348 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 SNAPC3Q92966 411 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 SMR3AQ99954 134 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 RPUSD1Q9UJJ7 312 aaKnown RBP17.09■□□□□ 0.33
RTCA-201ENST00000260563 TBC1D24Q9ULP9 559 aa17.09■□□□□ 0.33
RTCA-201ENST00000260563 TRBV23-1A0A0A0MS06 115 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 PPIAL4CA0A0B4J2A2 164 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 DEFA1P59665 94 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 DEFA3P59666 94 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 SRSF7Q16629 238 aaKnown RBP eCLIP17.08■□□□□ 0.32
RTCA-201ENST00000260563 OR52W1Q6IF63 320 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 BEST4Q8NFU0 473 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 Q9N2K0 584 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 MMP26Q9NRE1 261 aa17.08■□□□□ 0.32
RTCA-201ENST00000260563 HLA-DMAP28067 261 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 PAX2Q02962 417 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 DYRK1AQ13627 763 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 DCAF12L2Q5VW00 463 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 ZNF880Q6PDB4 577 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 TPRX1Q8N7U7 411 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 C8orf46Q8TAG6 207 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 CCDC107Q8WV48 283 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 KIF25Q9UIL4 384 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 TRAPPC2LQ9UL33 140 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 KCNS2Q9ULS6 477 aa17.07■□□□□ 0.32
RTCA-201ENST00000260563 MEIKINA0A087WXM9 373 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 FUOMA2VDF0 154 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 ZNF736B4DX44 427 aaPredicted RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 PLA2G10O15496 165 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 LY6G6DO95868 133 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 CD3DP04234 171 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 GATA3P23771 443 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 ERP29P30040 261 aaKnown RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 GLIPR1P48060 266 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 P2RX3P56373 397 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 RPL31P62899 125 aaKnown RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 ASAH1Q13510 395 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 CLEC9AQ6UXN8 241 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 Q6ZS49 121 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 MOB1BQ7L9L4 216 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 FAM185AQ8N0U4 392 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 DEDD2Q8WXF8 326 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 DACT3Q96B18 629 aaPredicted RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 ZNF286AQ9HBT8 521 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 C19orf12Q9NSK7 152 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 ANXA10Q9UJ72 324 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 INSIG2Q9Y5U4 225 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 IGKV1D-8A0A087WSZ0 117 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 AKAIN1P0CW23 69 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 PPIAL4GP0DN37 164 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 STEAP1BQ6NZ63 245 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 POC5Q8NA72 575 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 C7orf50Q9BRJ6 194 aaKnown RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 HRASLSQ9HDD0 168 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 MBNL3Q9NUK0 354 aaKnown RBP17.06■□□□□ 0.32
RTCA-201ENST00000260563 LPAR3Q9UBY5 353 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 MGAT4AQ9UM21 535 aa17.06■□□□□ 0.32
RTCA-201ENST00000260563 ODAMA1E959 279 aa17.05■□□□□ 0.32
RTCA-201ENST00000260563 CENPXA8MT69 81 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms