RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 SBSPONQ8IVN8 264 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 OR13C3Q8NGS6 347 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 OR10X1Q8NGY0 326 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 OSBPL10Q9BXB5 764 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 RIBC2Q9H4K1 309 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 SEBOXQ9HB31 216 aaPredicted RBP6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 ZFP57Q9NU63 452 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 IDI2-AS1Q9NZ38 188 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 WARS2Q9UGM6 360 aaKnown RBP6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 POMPQ9Y244 141 aa6.76□□□□□ -1.33
SHKBP1-220ENST00000599716 ALMS1Q8TCU4 4167 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 IGHV1-3A0A0C4DH29 117 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 FUOMA2VDF0 154 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 OOSP1A8MZH6 123 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 G3V2T6 193 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 J3QLW9 94 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 CCRL2O00421 344 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 HSD17B6O14756 317 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 SLC31A2O15432 143 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 RAMP3O60896 148 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 SULT1C4O75897 302 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 FAM107AO95990 144 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 IL1AP01583 271 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 CSN2P05814 226 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 HCKP08631 526 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 ZNF19P17023 458 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 ZP1P60852 638 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 SLC35B1P78383 322 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 GPR50Q13585 617 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 C9orf66Q5T8R8 295 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 ASPHD1Q5U4P2 390 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 TMEM244Q5VVB8 128 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 RSBN1Q5VWQ0 802 aaPredicted RBP6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 UTS2BQ765I0 119 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 C5orf24Q7Z6I8 188 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 FOXRED2Q8IWF2 684 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 Q8N9W7 124 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 OR51A2Q8NGJ7 313 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 OR51T1Q8NGJ9 327 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 OR5M8Q8NGP6 311 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 DNAJC9Q8WXX5 260 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 CREB3L1Q96BA8 519 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 SPSB1Q96BD6 273 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 MBOAT4Q96T53 435 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 PRRG3Q9BZD7 231 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 GNB4Q9HAV0 340 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 PALMDQ9NP74 551 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 OR6C3Q9NZP0 311 aa6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 AMMECR1Q9Y4X0 333 aaPredicted RBP6.75□□□□□ -1.33
SHKBP1-220ENST00000599716 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 SAC3D1A6NKF1 404 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 OR4C45A6NMZ5 311 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 E9PI62 339 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 GYG2O15488 501 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 FGF16O43320 207 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 HTR1AP08908 422 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 SLC2A2P11168 524 aaPredicted RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 LYL1P12980 280 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 MYF6P23409 242 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 RAB7AP51149 207 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 F2RL1P55085 397 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 KIR2DS1Q14954 304 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 KISS1Q15726 138 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 PNLIPRP3Q17RR3 467 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 CXorf66Q5JRM2 361 aaPredicted RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 TEX38Q6PEX7 206 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 HAPLN4Q86UW8 402 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 SATL1Q86VE3 508 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 Q8N6K4 173 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 CCDC197Q8NCU1 140 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 OR11H1Q8NG94 326 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 OR8U1Q8NH10 309 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 CNIH3Q8TBE1 160 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 CASTOR1Q8WTX7 329 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 CCDC107Q8WV48 283 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 SLC7A6OSQ96CW6 309 aaPredicted RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 C10orf35Q96D05 121 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 RNFT2Q96EX2 444 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 NRBF2Q96F24 287 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 PELI1Q96FA3 418 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 RCHY1Q96PM5 261 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 FAM192AQ9GZU8 254 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 ALX4Q9H161 411 aaPredicted RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 ABCG5Q9H222 651 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 ZCCHC4Q9H5U6 513 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 ISG20L2Q9H9L3 353 aaKnown RBP6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 PLSCR3Q9NRY6 295 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 WSB1Q9Y6I7 421 aa6.74□□□□□ -1.33
SHKBP1-220ENST00000599716 A0A1W2PP11 408 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 DAPL1A0PJW8 107 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 NPIPB11E5RHQ5 1161 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 G3V318 75 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 AP4M1O00189 453 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 GABRPO00591 440 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 SLC16A6O15403 523 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 CDRT1O95170 752 aa6.73□□□□□ -1.33
SHKBP1-220ENST00000599716 HTR3BO95264 441 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms