RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 HILS1P60008 231 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 RPS27AP62979 156 aaKnown RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 MRPS15P82914 257 aaKnown RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 QRFPP83859 136 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 MEF2CQ06413 473 aaPredicted RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 FAM189A2Q15884 450 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 PIGYQ3MUY2 71 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 C1orf122Q6ZSJ8 110 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 BPIFB2Q8N4F0 458 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 OR10K1Q8NGX5 313 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 LHFPL5Q8TAF8 219 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 PTX4Q96A99 478 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 Q96M66 194 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 NKX3-1Q99801 234 aaPredicted RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 SLC6A7Q99884 636 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 MRI1Q9BV20 369 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 TM2D1Q9BX74 207 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 SUCNR1Q9BXA5 334 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 RCC2Q9P258 522 aaKnown RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 KPTNQ9Y664 436 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 TRAV24A0A0B4J272 114 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 A0A1W2PP11 408 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 M0R1W7 72 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 GEMIN2O14893 280 aaKnown RBP8.14□□□□□ -1.11
GGA3-209ENST00000580646 LDLRAD4O15165 306 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 CRTAPO75718 401 aaPredicted RBP8.14□□□□□ -1.11
GGA3-209ENST00000580646 PTTG1O95997 202 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 IL1AP01583 271 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 TFF1P04155 84 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 NDUFB7P17568 137 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 DUSP1P28562 367 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 SDC2P34741 201 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 UNC119Q13432 240 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 GRK1Q15835 563 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 RSBN1Q5VWQ0 802 aaPredicted RBP8.14□□□□□ -1.11
GGA3-209ENST00000580646 SFXN4Q6P4A7 337 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 GDPD3Q7L5L3 318 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 NR2C2APQ86WQ0 139 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 CMTM4Q8IZR5 234 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 TMEM104Q8NE00 496 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 C22orf15Q8WYQ4 148 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 FAM3DQ96BQ1 224 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 JMJD8Q96S16 334 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 URM1Q9BTM9 101 aaKnown RBP8.14□□□□□ -1.11
GGA3-209ENST00000580646 TMEM59Q9BXS4 323 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 SELENOIQ9C0D9 397 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 ZC4H2Q9NQZ6 224 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 MBD2Q9UBB5 411 aa8.14□□□□□ -1.11
GGA3-209ENST00000580646 TRIM77I1YAP6 450 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 SIRPB1O00241 398 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 PEX14O75381 377 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 CA11O75493 328 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 RBP4P02753 201 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 CALCBP10092 127 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 MMP9P14780 707 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 RAB6AP20340 208 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 GABRR1P24046 479 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 SNU13P55769 128 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 OR10A3P58181 314 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 RPL31P62899 125 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 BAMBIQ13145 260 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 RBM39Q14498 530 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 TAF9Q16594 264 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 CTF1Q16619 201 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 C2orf76Q3KRA6 126 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 PAN3Q58A45 887 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 KLF17Q5JT82 389 aaPredicted RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 METTL11BQ5VVY1 283 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 METAP1DQ6UB28 335 aaPredicted RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 SLC16A12Q6ZSM3 486 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 ZNF767PQ75MW2 155 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 FGFRL1Q8N441 504 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 FAM89BQ8N5H3 189 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 OR4S1Q8NGB4 309 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 OR51D1Q8NGF3 324 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 H1FXQ92522 213 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 CORO2AQ92828 525 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 UPRTQ96BW1 309 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 RNF167Q9H6Y7 350 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 UNKLQ9H9P5 680 aaKnown RBP8.13□□□□□ -1.11
GGA3-209ENST00000580646 RAB22AQ9UL26 194 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 LINC00312Q9Y6C7 94 aa8.13□□□□□ -1.11
GGA3-209ENST00000580646 TMEM272A0A1B0GTI8 110 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 hCG_1809904A0A1W2PP81 198 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 A0A1W2PPE2 198 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 A0A1W2PQ09 198 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 A0A1W2PR64 198 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 A0A1W2PRV1 198 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 hADV38S2A0JD32 116 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 CENPXA8MT69 81 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 J3QRK9 145 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 MPIG6BO95866 241 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 FUT3P21217 361 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 CD40LGP29965 261 aa8.12□□□□□ -1.11
GGA3-209ENST00000580646 TALDO1P37837 337 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms