RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	NPY4R	P50391	375 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	AP3S2	P59780	193 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	EDDM3A	Q14507	147 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	C16orf87	Q6PH81	154 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780		Q6ZPA2	131 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZFAND2B	Q8WV99	257 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	SNAPC3	Q92966	411 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780		Q9N2K0	584 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MBNL3	Q9NUK0	354 aa	Known RBP	13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KIF25	Q9UIL4	384 aa		13.89	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ANKRD20A5P	A0PJZ0	165 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ODAM	A1E959	279 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DVL1	O14640	695 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	GPR37	O15354	613 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	FCN3	O75636	299 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MT-ND4	P03905	459 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	SLC25A16	P16260	332 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TBP	P20226	339 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	INPP1	P49441	399 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TAS2R19	P59542	299 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	AES	Q08117	197 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KLF9	Q13886	244 aa	Predicted RBP	13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ACTBL2	Q562R1	376 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	STEAP3	Q658P3	488 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TRAT1	Q6PIZ9	186 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF554	Q86TJ5	538 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	LYSMD2	Q8IV50	215 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	GVQW1	Q8N7I0	195 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TMEM229B	Q8NBD8	167 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF286A	Q9HBT8	521 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	LPAR3	Q9UBY5	353 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	PCDHB10	Q9UN67	800 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	NAV2	Q8IVL1	2488 aa		13.88	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	NBPF19	A0A087WUL8	3843 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TRBV23-1	A0A0A0MS06	115 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KIR2DS1	A0A191URI9	304 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	IGHV2-5	P01817	119 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	WNT2	P09544	360 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	NDUFB7	P17568	137 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KIR2DS4	P43632	304 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	EDDM3B	P56851	147 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TAS2R46	P59540	309 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	HLA-DRB3	P79483	266 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	IFITM3	Q01628	133 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	KIR2DS1	Q14954	304 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	C11orf91	Q3C1V1	193 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	C6orf183	Q5T699	404 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF57	Q68EA5	555 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF841	Q6ZN19	808 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TOMM5	Q8N4H5	51 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	BEST4	Q8NFU0	473 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR4K15	Q8NH41	348 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	RAB39B	Q96DA2	213 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR6C3	Q9NZP0	311 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CLN8	Q9UBY8	286 aa		13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	HECTD1	Q9ULT8	2610 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	IGHV4-30-2	A0A087WSY4	118 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MEIKIN	A0A087WXM9	373 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780		A8MXK9	166 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ZNF736	B4DX44	427 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CD74	P04233	296 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	GLP1R	P43220	463 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	GLIPR1	P48060	266 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MEF2C	Q06413	473 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DYRK1A	Q13627	763 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	HMGN3	Q15651	99 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CLEC12B	Q2HXU8	276 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	WDR25	Q64LD2	544 aa	Predicted RBP	13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	PRSS57	Q6UWY2	283 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CLDND2	Q8NHS1	167 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	SETD6	Q8TBK2	473 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	C7orf50	Q9BRJ6	194 aa	Known RBP	13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ING3	Q9NXR8	418 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ANXA10	Q9UJ72	324 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TRAPPC2L	Q9UL33	140 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	POLQ	O75417	2590 aa		13.86	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	DIRAS3	O95661	229 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	AKAIN1	P0CW23	69 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	FAU	P35544	74 aa	Known RBP	13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ASAH1	Q13510	395 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	CR1L	Q2VPA4	569 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ESCO2	Q56NI9	601 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780		Q5PR19	223 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR52W1	Q6IF63	320 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TCF23	Q7RTU1	214 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	FGFRL1	Q8N441	504 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TPRX1	Q8N7U7	411 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OR13A1	Q8NGR1	328 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	MAFIP	Q8WZ33	124 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	ST6GALNAC5	Q9BVH7	336 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	NARFL	Q9H6Q4	476 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	OPN4	Q9UHM6	478 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TBC1D24	Q9ULP9	559 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	LINC00312	Q9Y6C7	94 aa		13.85	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	IGKV1D-8	A0A087WSZ0	117 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TRGV10	A0A0A0MS01	117 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	hADV38S2	A0JD32	116 aa		13.84	□□□□□ -0.19
CDK5RAP3-215	ENST00000579780	TRDC	B7Z8K6	153 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms