RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SIRPB1O00241 398 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 GABRPO00591 440 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 BAG2O95816 211 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 ARG1P05089 322 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 CD1AP06126 327 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 HCKP08631 526 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 IGFBP3P17936 291 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-218ENST00000528877 DUSP1P28562 367 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 CAPGP40121 348 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 PTGFRP43088 359 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 GTF2A1P52655 376 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-218ENST00000528877 TAS2R43P59537 309 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 SRSF4Q08170 494 aaKnown RBP5.68□□□□□ -1.5
ITGB1-218ENST00000528877 RCN1Q15293 331 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 C2orf68Q2NKX9 166 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 YIF1BQ5BJH7 314 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 DMKNQ6E0U4 476 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-218ENST00000528877 SLC35E4Q6ICL7 350 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 OR52W1Q6IF63 320 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 LINC00596Q86U02 117 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 RTN4RL2Q86UN3 420 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 TPRX1Q8N7U7 411 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 OR51A2Q8NGJ7 313 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 PGLYRP3Q96LB9 341 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 TMEM138Q9NPI0 162 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 PLCXD1Q9NUJ7 323 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 FKBP14Q9NWM8 211 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 BABAM2Q9NXR7 383 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 TAS2R4Q9NYW5 299 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 OR6C3Q9NZP0 311 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 PITPNC1Q9UKF7 332 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 GSTK1Q9Y2Q3 226 aa5.68□□□□□ -1.5
ITGB1-218ENST00000528877 DNAH3Q8TD57 4116 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TRBV5-7A0A0A0MS05 114 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TRAV24A0A0B4J272 114 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 EFCAB10A6NFE3 127 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF729A6NN14 1252 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-218ENST00000528877 OOSP1A8MZH6 123 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 MAGEB3O15480 346 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 MMP23AO75900 390 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 INMTO95050 263 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CLIC3O95833 236 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 LALBAP00709 142 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 GNAO1P09471 354 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CGB3P0DN86 165 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CGB7P0DN87 165 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TMEM225BP0DP42 221 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF44P15621 663 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CDK2P24941 298 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 GLIPR1P48060 266 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 RBM11P57052 281 aaKnown RBP5.67□□□□□ -1.5
ITGB1-218ENST00000528877 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 RPS11P62280 158 aaKnown RBP eCLIP5.67□□□□□ -1.5
ITGB1-218ENST00000528877 PPP3R1P63098 170 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 MED21Q13503 144 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 RIPK1Q13546 671 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 HERPUD1Q15011 391 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 PRAMEF5Q5TYX0 476 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 OR2G6Q5TZ20 316 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 RNLSQ5VYX0 342 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 LAIR2Q6ISS4 152 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 C16orf82Q7Z2V1 217 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CDH26Q8IXH8 852 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 C8orf59Q8N0T1 100 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-218ENST00000528877 DHRSXQ8N5I4 330 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 OR2T6Q8NHC8 308 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF596Q8TC21 504 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TNFAIP8L1Q8WVP5 186 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CYGBQ8WWM9 190 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 THRSPQ92748 146 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 CREB3L1Q96BA8 519 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TMEM80Q96HE8 168 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF702PQ9H963 129 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 TCF7L1Q9HCS4 588 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 SERTAD4Q9NUC0 356 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 PSORS1C1Q9UIG5 152 aa5.67□□□□□ -1.5
ITGB1-218ENST00000528877 SIRT4Q9Y6E7 314 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-218ENST00000528877 KBTBD11-OT1A0A1B0GTJ5 212 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 NPIPB11E5RHQ5 1161 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 H0YJX3 145 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 LY6LH3BQJ8 138 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 F2RL2O00254 374 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 DEGS1O15121 323 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF780AO75290 641 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-218ENST00000528877 MPIG6BO95866 241 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 IL1AP01583 271 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 CALCBP10092 127 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 PAX6P26367 422 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 HTR1DP28221 377 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 BDKRB2P30411 391 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 ZNF93P35789 620 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-218ENST00000528877 OR3A4PP47883 348 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 SOX2P48431 317 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 ARHGDIBP52566 201 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 SNU13P55769 128 aaKnown RBP5.66□□□□□ -1.5
ITGB1-218ENST00000528877 AESQ08117 197 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 ST3GAL4Q11206 333 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 ATXN7L3Q14CW9 347 aaPredicted RBP5.66□□□□□ -1.5
ITGB1-218ENST00000528877 RSU1Q15404 277 aa5.66□□□□□ -1.5
ITGB1-218ENST00000528877 SSX2Q16385 188 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms