RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
CCS-203ENST00000526058 PAX5Q02548 391 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 SPHARQ15513 63 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 MED22Q15528 200 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 ACSM3Q53FZ2 586 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 FAM27D1Q5T7N8 215 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 AWAT2Q6E213 333 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 UNQ9370/PRO34162Q6UXP9 181 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 ZNF565Q8N9K5 539 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 MRGPRDQ8TDS7 321 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 KIRREL1Q96J84 757 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 TMED9Q9BVK6 235 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 DUSP21Q9H596 190 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 TPRKBQ9Y3C4 175 aa13.69□□□□□ -0.22
CCS-203ENST00000526058 A0A087X0M5 115 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 A0A1B0GX30 115 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 IGHV3-7P01780 117 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 MAPK3P27361 379 aaPredicted RBP13.68□□□□□ -0.22
CCS-203ENST00000526058 DYNLT3P51808 116 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 ATAD3CQ5T2N8 411 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 RFESDQ8TAC1 157 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 ZNF596Q8TC21 504 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 VCX3BQ9H321 246 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 TCF7L1Q9HCS4 588 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 PCDHB16Q9NRJ7 776 aa13.68□□□□□ -0.22
CCS-203ENST00000526058 F2RL2O00254 374 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 TOR1AO14656 332 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 IL1AP01583 271 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 CD24P25063 80 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 EFNB2P52799 333 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 GPR176Q14439 515 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 LTC4SQ16873 150 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 MS4A15Q8N5U1 240 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 TMEM104Q8NE00 496 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 LEAP2Q969E1 77 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 BANF2Q9H503 90 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
CCS-203ENST00000526058 LINC00574Q9H8X3 128 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 IDI2-AS1Q9NZ38 188 aa13.67□□□□□ -0.22
CCS-203ENST00000526058 LEUTXA8MZ59 168 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 NPIPB11E5RHQ5 1161 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 BUB1B-PAK6H3BSN5 160 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 RGS10O43665 173 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 CRHBPP24387 322 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 SSTR5P35346 364 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 VHLP40337 213 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 PRRX1P54821 245 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
CCS-203ENST00000526058 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
CCS-203ENST00000526058 LIPKQ5VXJ0 399 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 HIST2H2BDQ6DRA6 164 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 OR2T6Q8NHC8 308 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 NEK7Q8TDX7 302 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 THRSPQ92748 146 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 CYYR1Q96J86 154 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 CNBD2Q96M20 576 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 PITPNC1Q9UKF7 332 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 NOTCH1P46531 2555 aa13.66□□□□□ -0.22
CCS-203ENST00000526058 TMEM30CPA0ZSE6 113 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 FAM90A22PA8MWA6 464 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 LY6LH3BQJ8 138 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 CRTAPO75718 401 aaPredicted RBP13.65□□□□□ -0.22
CCS-203ENST00000526058 SC5DO75845 299 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 HSMCR30P0CW71 290 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 MGMTP16455 207 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 GPR50Q13585 617 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 FBLN7Q53RD9 439 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 CEACAM19Q7Z692 300 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 UFD1Q92890 307 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 TMEM203Q969S6 136 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 MRPS24Q96EL2 167 aaKnown RBP13.65□□□□□ -0.22
CCS-203ENST00000526058 UQCC2Q9BRT2 126 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 SELENOIQ9C0D9 397 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 CCDC90BQ9GZT6 254 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 RCC2Q9P258 522 aaKnown RBP13.65□□□□□ -0.22
CCS-203ENST00000526058 PSG11Q9UQ72 335 aa13.65□□□□□ -0.22
CCS-203ENST00000526058 TET2Q6N021 2002 aaPredicted RBP13.64□□□□□ -0.23
CCS-203ENST00000526058 J3QR06 171 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 TIMM23O14925 209 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 MT-ND4P03905 459 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 SRMP19623 302 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 MAP2K4P45985 399 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 HSPA13P48723 471 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 BLCAPP62952 87 aa13.64□□□□□ -0.23
CCS-203ENST00000526058 RBM48Q5RL73 367 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms