RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 IGHV1-69-2A0A0G2JMI3 117 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 LRRC30A6NM36 301 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 TMEM178BH3BS89 294 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 SLC33A1O00400 549 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 HAND1O96004 215 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 CYB5R3P00387 301 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 PMP2P02689 132 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 FCGR3AP08637 254 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 CTXN2P0C2S0 81 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 PSG2P11465 335 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 COX6B1P14854 86 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 DUSP1P28562 367 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 CD80P33681 288 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 KCNJ3P48549 501 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 MECP2P51608 486 aaKnown RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 GMFBP60983 142 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 UBE2MP61081 183 aaKnown RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 SURF2Q15527 256 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 CARTPTQ16568 116 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 MICBQ29980 383 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 C4orf46Q504U0 113 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 PAN3Q58A45 887 aaKnown RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 FAM201AQ5SY85 155 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 SHEQ5VZ18 495 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 TEX36Q5VZQ5 186 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 OR52W1Q6IF63 320 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 GLDNQ6ZMI3 551 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 PEG10Q86TG7 708 aaKnown RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 GVQW1Q8N7I0 195 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 SUMF2Q8NBJ7 301 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 OR4S1Q8NGB4 309 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 OR6F1Q8NGZ6 308 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 VRK1Q99986 396 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 NEURL2Q9BR09 285 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 DPCDQ9BVM2 203 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 CLEC4MQ9H2X3 399 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 MYOZ1Q9NP98 299 aaPredicted RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 TMEM106BQ9NUM4 274 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 TREM2Q9NZC2 230 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 ANXA10Q9UJ72 324 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 LAMP3Q9UQV4 416 aa7.14□□□□□ -1.27
VAPB-206ENST00000520497 C14orf166Q9Y224 244 aaKnown RBP7.14□□□□□ -1.27
VAPB-206ENST00000520497 RFPL4AA6NLU0 287 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 OR2AT4A6NND4 320 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 RFPL4AL1F8VTS6 287 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 OVOL3O00110 214 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 SIRPB1O00241 398 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ZNF737O75373 536 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 RP2O75695 350 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 FSTL3O95633 263 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 DIRAS3O95661 229 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 NAPSAO96009 420 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ANXA3P12429 323 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 MUC1P15941 1255 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 FPR2P25090 351 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 CEBPDP49716 269 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 HERV-K104P61576 105 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 MRPS11P82912 194 aaKnown RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 PAX5Q02548 391 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 STUMQ69YW2 141 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 FAHD2BQ6P2I3 314 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 BRICD5Q6PL45 260 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 C20orf204Q6ZNR8 217 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 Q6ZPA2 131 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 Q6ZS49 121 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 TMED4Q7Z7H5 227 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 C1orf87Q8N0U7 546 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ZNF295-AS1Q8N0V1 137 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 GAPTQ8N292 157 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 CD177Q8N6Q3 437 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 OR4D10Q8NGI6 311 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 TERB2Q8NHR7 220 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ANGPTL6Q8NI99 470 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ZFAND1Q8TCF1 268 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 NEU4Q8WWR8 484 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 ASB13Q8WXK3 278 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 DYRK2Q92630 601 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 RDH5Q92781 318 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 FAHD2AQ96GK7 314 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 SLC6A7Q99884 636 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 HDHD3Q9BSH5 251 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 TMUB1Q9BVT8 246 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 RAB1BQ9H0U4 201 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ALX4Q9H161 411 aaPredicted RBP7.13□□□□□ -1.27
VAPB-206ENST00000520497 DNAJB11Q9UBS4 358 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 ZNF69Q9UC07 566 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 OR14J1Q9UGF5 321 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 WIPI2Q9Y4P8 454 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 CSMD1Q96PZ7 3565 aa7.13□□□□□ -1.27
VAPB-206ENST00000520497 MYO9AB2RTY4 2548 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 TRBV6-6A0A0A6YYG2 114 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 A0A0B4J293 547 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 OOEPA6NGQ2 149 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 LGALS8O00214 317 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 PSPNO60542 156 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 TFF1P04155 84 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 TK1P04183 234 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 ZNF735P0CB33 412 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 OR5H8P0DN80 308 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms