RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 DUX4L6P0CJ89 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4L7P0CJ90 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 SMCO1Q147U7 214 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 SEM1Q6ZVN7 128 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 CXorf67Q86X51 503 aaPredicted RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 STPG2Q8N412 459 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 FAM71E2Q8N5Q1 922 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 BOLLQ8N9W6 283 aaKnown RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 ZNF610Q8N9Z0 462 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DNTTIP1Q9H147 329 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 PCDHB10Q9UN67 800 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 KRBOX1C9JBD0 128 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 SIRPB1O00241 398 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 OR2H2O95918 312 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 TMEM268Q5VZI3 342 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 RPL7L1Q6DKI1 246 aaKnown RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 FAM185AQ8N0U4 392 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 ZNF565Q8N9K5 539 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 OR1S2Q8NGQ3 325 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 BOD1Q96IK1 185 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 TMEM222Q9H0R3 208 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 ZC4H2Q9NQZ6 224 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 TAS2R3Q9NYW6 316 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 TINAGQ9UJW2 476 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 AMDHD2Q9Y303 409 aa11.04□□□□□ -0.64
SEC13-216ENST00000479868 HEATR1Q9H583 2144 aaKnown RBP11.04□□□□□ -0.64
SEC13-216ENST00000479868 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 GPR31O00270 319 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 GLAP06280 429 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 GRPP07492 148 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 CTXN2P0C2S0 81 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 CECR9P0C854 216 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 OR8G1Q15617 311 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 SPERTQ8NA61 448 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 PLPPR1Q8TBJ4 325 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 SUN5Q8TC36 379 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 TMEM100Q9NV29 134 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 SLC33A1O00400 549 aaPredicted RBP11.03□□□□□ -0.64
SEC13-216ENST00000479868 HSD17B6O14756 317 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 MLNRO43193 412 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 CGAP01215 116 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 FAM157CP0CG43 387 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 RND3P61587 244 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 HLA-DRB3P79483 266 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 IGFL3Q6UXB1 125 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 Q8IYB0 196 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 RHOFQ9HBH0 211 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 ASF1BQ9NVP2 202 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 KIAA2026Q5HYC2 2103 aa11.03□□□□□ -0.64
SEC13-216ENST00000479868 NXPH2O95156 264 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 NBL1P41271 181 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 TMEM33P57088 247 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 CLEC9AQ6UXN8 241 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 OR4A4PQ8NGN8 299 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 RNF141Q8WVD5 230 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 KIRREL1Q96J84 757 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 SMIM3Q9BZL3 60 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 ZNF71Q9NQZ8 489 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 FZR1Q9UM11 496 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 PROCRQ9UNN8 238 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 UBE2J1Q9Y385 318 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 K7EM74 188 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 TAAR5O14804 337 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 TNFSF12O43508 249 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 ZNF324BQ6AW86 544 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 OR8G5Q8NG78 346 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 OR10J5Q8NHC4 309 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 IL1F10Q8WWZ1 152 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 ERGIC1Q969X5 290 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 TMEM56Q96MV1 263 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 MS4A7Q9GZW8 240 aaPredicted RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 PURGQ9UJV8 347 aaKnown RBP11.02□□□□□ -0.65
SEC13-216ENST00000479868 ZDHHC8Q9ULC8 765 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 TMEM56-RWDD3S4R434 201 aa11.02□□□□□ -0.65
SEC13-216ENST00000479868 ANKRD11Q6UB99 2663 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 ATMQ13315 3056 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 NKX2-6A6NCS4 301 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 MBD3L4A6NDZ8 208 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 MBD3L3A6NE82 208 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 MBD3L5A6NJ08 208 aaPredicted RBP11.01□□□□□ -0.65
SEC13-216ENST00000479868 E5RGE8 158 aa11.01□□□□□ -0.65
SEC13-216ENST00000479868 SIGLEC5O15389 551 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms