RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 GCDHQ92947 438 aaPredicted RBP12.87□□□□□ -0.35
ERCC3-206ENST00000462306 MEGF9Q9H1U4 602 aa12.87□□□□□ -0.35
ERCC3-206ENST00000462306 AK6Q9Y3D8 172 aaKnown RBP12.87□□□□□ -0.35
ERCC3-206ENST00000462306 IGHV2-26A0A0B4J1V2 119 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 KBTBD11-OT1A0A1B0GTJ5 212 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-206ENST00000462306 CCRL2O00421 344 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
ERCC3-206ENST00000462306 ARG1P05089 322 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 OMGP23515 440 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 PSMB9P28065 219 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 QRFPP83859 136 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 SLC35E4Q6ICL7 350 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 ZNF565Q8N9K5 539 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 OR6M1Q8NGM8 313 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 TAF15Q92804 592 aaKnown RBP eCLIP12.86□□□□□ -0.35
ERCC3-206ENST00000462306 FAM46BQ96A09 425 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 CST11Q9H112 138 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 DPAGT1Q9H3H5 408 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
ERCC3-206ENST00000462306 SHISA3A0PJX4 238 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 SLC17A2O00624 439 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 MPIG6BO95866 241 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 GALP22466 123 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 PAX6P26367 422 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 GLP1RP43220 463 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 LGALS4P56470 323 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 OR52W1Q6IF63 320 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 RAB12Q6IQ22 244 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 DYNAPQ8N1N2 210 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 CYYR1Q96J86 154 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 KCNK15Q9H427 330 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
ERCC3-206ENST00000462306 TBL2Q9Y4P3 447 aaKnown RBP12.85□□□□□ -0.35
ERCC3-206ENST00000462306 TENM1Q9UKZ4 2725 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 TRAV1-2A0A0B4J238 106 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 TRAV39A0A0B4J263 110 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 TMEM14DPA8MWL7 114 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 NPIPB11E5RHQ5 1161 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 BPNT1O95861 308 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 FUT3P21217 361 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 CD34P28906 385 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 RPS27AP62979 156 aaKnown RBP12.84□□□□□ -0.35
ERCC3-206ENST00000462306 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
ERCC3-206ENST00000462306 UNC119Q13432 240 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 AANATQ16613 207 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 UTF1Q5T230 341 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 SYT6Q5T7P8 510 aaPredicted RBP12.84□□□□□ -0.35
ERCC3-206ENST00000462306 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 GAPTQ8N292 157 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 ABHD12Q8N2K0 398 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 KCNG3Q8TAE7 436 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 DYRK2Q92630 601 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 PLGRKTQ9HBL7 147 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 PEX16Q9Y5Y5 336 aa12.84□□□□□ -0.35
ERCC3-206ENST00000462306 A0A087X0M5 115 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 A0A1B0GX30 115 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 GPR137BO60478 399 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 PDCD6O75340 191 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 IL1AP01583 271 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 MT-ND4P03905 459 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 GLAP06280 429 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.36
ERCC3-206ENST00000462306 P2RY14Q15391 338 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 AWAT1Q58HT5 328 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 RTN4RL2Q86UN3 420 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 OR5R1Q8NH85 324 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 PIFOQ8TCI5 191 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 MALSU1Q96EH3 234 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 SSX3Q99909 188 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 TM2D1Q9BX74 207 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 TMEM59Q9BXS4 323 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 ZNF286AQ9HBT8 521 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 V9GY05 133 aa12.83□□□□□ -0.36
ERCC3-206ENST00000462306 FAM172BPA6NC97 362 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 BTBD17A6NE02 478 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 H3BUX3 64 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 IGLV1-47P01700 117 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 ARSBP15848 533 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 GZMHP20718 246 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 FGF9P31371 208 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-206ENST00000462306 SSTR5P35346 364 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 PSMD7P51665 324 aa12.82□□□□□ -0.36
ERCC3-206ENST00000462306 RPL15P61313 204 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms