RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 MPLP40238 635 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 SUMO3P55854 103 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-206ENST00000431893 ANKRD55Q3KP44 614 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 PDE4DIPQ5VU43 2346 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 RGPD1P0DJD0 1748 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 CD74P04233 296 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 GABRG2P18507 467 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 FGF9P31371 208 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-206ENST00000431893 EFNB2P52799 333 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 KRTCAP3Q53RY4 240 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 CARFQ8N187 725 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 TMEM167BQ9NRX6 74 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 TAF1P21675 1872 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 GP1BAP07359 652 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 LINC00615Q96LM1 132 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF488Q96MN9 340 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 CACFD1Q9UGQ2 172 aa10.06□□□□□ -0.8
SEC16A-206ENST00000431893 AMMECR1Q9Y4X0 333 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-206ENST00000431893 IGHV3OR16-12A0A075B7B8 117 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 KCNE1BA0A087WTH5 132 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 HMSDA8MTL9 139 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 K7EQS6 105 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 OR4S2Q8NH73 311 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ZPBPQ9BS86 351 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 MBPP02686 304 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 TMEM50BP56557 158 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 AESQ08117 197 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 FAM209AQ5JX71 171 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF385CQ66K41 422 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 OR8G5Q8NG78 346 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 VSTM2LQ96N03 204 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 CRISPLD2Q9H0B8 497 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 MFSD2BA6NFX1 497 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 HRKO00198 91 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 EMP1P54849 157 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 SOX8P57073 446 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 RUNX1Q01196 453 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 HIKESHIQ53FT3 197 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF770Q6IQ21 691 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ATOH7Q8N100 152 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 MVB12AQ96EY5 273 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ANGPTL4Q9BY76 406 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 TINAGQ9UJW2 476 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 SIAH2O43255 324 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 PLAUP00749 431 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 SPANXN1Q5VSR9 72 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 BHLHA15Q7RTS1 189 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 GABRG3Q99928 467 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 HSPB9Q9BQS6 159 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 TMUB1Q9BVT8 246 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 IL36RNQ9UBH0 155 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 F2RL2O00254 374 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 CRHP06850 196 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 KLK2P20151 261 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
SEC16A-206ENST00000431893 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 SLC35E3Q7Z769 313 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 ANXA10Q9UJ72 324 aa10.05□□□□□ -0.8
SEC16A-206ENST00000431893 SPTY2D1-AS1A0A0U1RR47 76 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 WDR25Q64LD2 544 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 OOEPA6NGQ2 149 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 FAM3BP58499 235 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 OR5R1Q8NH85 324 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 NKX2-2O95096 273 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 PRR35P0CG20 571 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 RELBQ01201 579 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 GUCA2BQ16661 112 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 KHDC3LQ587J8 217 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 JMJD6Q6NYC1 403 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 KLF7O75840 302 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 SLC25A30Q5SVS4 291 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 PTPMT1Q8WUK0 201 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 SNRNP40Q96DI7 357 aaKnown RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 KLK13Q9UKR3 277 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 M0QZK8 103 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
SEC16A-206ENST00000431893 MAGEA5P43359 124 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 RPS4Y2Q8TD47 263 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
SEC16A-206ENST00000431893 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 IGKV3OR2-268A0A0C4DH90 116 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 DEDDO75618 318 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 STAG3L2P0CL84 134 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 FOXL2P58012 376 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 PRSS8Q16651 343 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 SMIM6P0DI80 62 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 SRFP11831 508 aa10.03□□□□□ -0.8
SEC16A-206ENST00000431893 HIST1H1BP16401 226 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms