RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PROB1E7EW31 1015 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 ABHD14AQ9BUJ0 271 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 GLRX2Q9NS18 164 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 hCG_1809904A0A1W2PP81 198 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 A0A1W2PPE3 182 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 A0A1W2PR64 198 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 A0A1W2PRV1 198 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 CLEC18AA5D8T8 446 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 TUSC2O75896 110 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 ARG1P05089 322 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 CCL2P13500 99 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 CCL20P78556 96 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 FOXO1Q12778 655 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 NMSQ5H8A3 153 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 C9orf135Q5VTT2 229 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 CLEC18CQ8NCF0 446 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 SMDT1Q9H4I9 107 aa21.91■■□□□ 1.1
COL13A1-203ENST00000398969 IGKV3D-15A0A087WSY6 115 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 A0A096LPE4 126 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 A0A1W2PPZ6 126 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 JMJD7P0C870 316 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 HOXB1P14653 301 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-203ENST00000398969 UCP1P25874 307 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 VAMP2P63027 116 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 ODF3L1Q8IXM7 274 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 FAM24BQ8N5W8 94 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 ZFP62Q8NB50 900 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-203ENST00000398969 SNIP1Q8TAD8 396 aaKnown RBP21.9■■□□□ 1.1
COL13A1-203ENST00000398969 SIGLEC12Q96PQ1 595 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 MTCH1Q9NZJ7 389 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 A0A1W2PPE2 198 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 DUXBA0A1W2PPF3 345 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 CDRT15L2A8MXV6 281 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 ZNF806P0C7X5 589 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 CBR1P16152 277 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 TSC22D1Q15714 1073 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 CEACAM21Q3KPI0 293 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 SPSB3Q6PJ21 355 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 ZDHHC23Q8IYP9 409 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 OR5C1Q8NGR4 320 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 DDA1Q9BW61 102 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 LINC00470Q9BZP3 86 aa21.9■■□□□ 1.1
COL13A1-203ENST00000398969 IGKV1-6A0A0C4DH72 117 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 PRSS44E7EML9 344 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 HSPB6O14558 160 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 HSD17B6O14756 317 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 ZNF14P17017 642 aaPredicted RBP21.89■■□□□ 1.09
COL13A1-203ENST00000398969 SOHLH1Q5JUK2 328 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 SUMF2Q8NBJ7 301 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 OR8G5Q8NG78 346 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 CT55Q8WUE5 264 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 CCL28Q9NRJ3 127 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 PCSK5Q92824 1860 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 KIR2DS1A0A191URI9 304 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 C5orf49A4QMS7 147 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 TMEM50AO95807 157 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 HLA-HP01893 362 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 SERPINA7P05543 415 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 VDAC1P21796 283 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 KIR2DS4P43632 304 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 ID3Q02535 119 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 KIR2DS1Q14954 304 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 MPV17LQ2QL34 196 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 MRPL21Q7Z2W9 205 aaKnown RBP21.89■■□□□ 1.09
COL13A1-203ENST00000398969 PLPPR1Q8TBJ4 325 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 SPRY4Q9C004 299 aa21.89■■□□□ 1.09
COL13A1-203ENST00000398969 ZNF732B4DXR9 585 aa21.88■■□□□ 1.09
COL13A1-203ENST00000398969 DYNLT3P51808 116 aa21.88■■□□□ 1.09
COL13A1-203ENST00000398969 RAB1AP62820 205 aa21.88■■□□□ 1.09
COL13A1-203ENST00000398969 RBMS3Q6XE24 437 aaKnown RBP21.88■■□□□ 1.09
COL13A1-203ENST00000398969 NEK7Q8TDX7 302 aa21.88■■□□□ 1.09
COL13A1-203ENST00000398969 ATP23Q9Y6H3 246 aa21.88■■□□□ 1.09
COL13A1-203ENST00000398969 RBFOX3A6NFN3 312 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 HSPA12AO43301 675 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 S100A8P05109 93 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 SPINK14Q6IE38 97 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 PSMF1Q92530 271 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 PRRG4Q9BZD6 226 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 C9orf172C9J069 976 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 CST7O76096 145 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 SMIM6P0DI80 62 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 SRYQ05066 204 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 MALSU1Q96EH3 234 aa21.87■■□□□ 1.09
COL13A1-203ENST00000398969 BOKQ9UMX3 212 aaPredicted RBP21.87■■□□□ 1.09
COL13A1-203ENST00000398969 PUS1Q9Y606 427 aaKnown RBP eCLIP21.87■■□□□ 1.09
COL13A1-203ENST00000398969 A0A1W2PNU3 283 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-203ENST00000398969 ZNF503-AS2A6NEH8 195 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 TRAPPC2LH3BP13 241 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 MMP9P14780 707 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 FOXG1P55316 489 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-203ENST00000398969 SSPNQ14714 243 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 METTL1Q9UBP6 276 aaKnown RBP21.86■■□□□ 1.09
COL13A1-203ENST00000398969 CTXN2P0C2S0 81 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 ITGA3P26006 1051 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 BAXQ07812 192 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 MKXQ8IYA7 352 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 IL22RA1Q8N6P7 574 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 OR5D13Q8NGL4 314 aa21.86■■□□□ 1.09
COL13A1-203ENST00000398969 APOBEC3DQ96AK3 386 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-203ENST00000398969 TMEM9BQ9NQ34 198 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms