RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RTL8AQ9BWD3 113 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 GPR87Q9BY21 358 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 GCM1Q9NP62 436 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 B3GAT1Q9P2W7 334 aa11.07□□□□□ -0.64
DNMT3A-202ENST00000321117 CSRP1P21291 193 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 BSXQ3C1V8 233 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 FAM131CQ96AQ9 280 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 BOD1Q96IK1 185 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 A0A0J9YW62 118 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 DUXBA0A1W2PPF3 345 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 RPL36A-HNRNPH2H7BZ11 118 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 GRPP07492 148 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 IFI44Q8TCB0 444 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF524Q96C55 264 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 VAX2Q9UIW0 290 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 POLDIP2Q9Y2S7 368 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 KRASP01116 189 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 GNG3P63215 75 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 H1FOOQ8IZA3 346 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 OR10V1Q8NGI7 309 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 OR2H1Q9GZK4 316 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 SLC25A22Q9H936 323 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 TGIF2-C20orf24A0A0A6YYL0 155 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 FAM166BA8MTA8 275 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 CCL2P13500 99 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 LIFP15018 202 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 BCL3P20749 454 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 SRD5A2P31213 254 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 ARR3P36575 388 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 GABRA2P47869 451 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 GABRA4P48169 554 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 RPS23P62266 143 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 OR8G1Q15617 311 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 DCAF12Q5T6F0 453 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 NAT8Q9UHE5 227 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 PITPNC1Q9UKF7 332 aa11.06□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 EPOPA6NHQ4 379 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 SRSF10O75494 262 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 BCL2P10415 239 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 MDKP21741 143 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 SSTP61278 116 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 ERVS71-1P61550 626 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 PKIAP61925 76 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 FAM58AQ8N1B3 248 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 TP53RKQ96S44 253 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 GNG12Q9UBI6 72 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 OBSL1O75147 1896 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF92Q03936 586 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 HIKESHIQ53FT3 197 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF880Q6PDB4 577 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 MRGPRGQ86SM5 289 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 TREM2Q9NZC2 230 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 PRSS50Q9UI38 385 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 SH2D1BO14796 132 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 FBP1P09467 338 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 KITLGP21583 273 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 UCP3P55916 312 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 COL19A1Q14993 1142 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 ACOT6Q3I5F7 207 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 DPPA3Q6W0C5 159 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 SPEM1Q8N4L4 309 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 PPP1R35Q8TAP8 253 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 POC1BQ8TC44 478 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 CTDSP1Q9GZU7 261 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 V9GYS6 101 aa11.05□□□□□ -0.64
DNMT3A-202ENST00000321117 CXorf65A6NEN9 183 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 SPINK2P20155 84 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 KCNMB1Q16558 191 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 ABHD14BQ96IU4 210 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 MMP9P14780 707 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 CCL1P22362 96 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 CD81P60033 236 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 MARS2Q96GW9 593 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 TUBG2Q9NRH3 451 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 FANCMQ8IYD8 2048 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 A0A1B0GU03 582 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 IGSF23A1L1A6 192 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 SCTP09683 121 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 PSG4Q00888 419 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 PMS2P11Q13670 270 aa11.04□□□□□ -0.64
DNMT3A-202ENST00000321117 LINC00696Q6ZRV3 163 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms