RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 METTL15P1P0C7V9 234 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 LSM6P62312 80 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 DHODHQ02127 395 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 ST3GAL2Q16842 350 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 OR6N2Q8NGY6 317 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 OR5AK2Q8NH90 309 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 OR2V1Q8NHB1 315 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM106AQ96A25 262 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 MRPL36Q9P0J6 103 aaKnown RBP4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 LPAR3Q9UBY5 353 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 POLDIP2Q9Y2S7 368 aa4.64□□□□□ -1.67
TOPBP1-201ENST00000260810 TUBAL3A6NHL2 446 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM212A6NML5 194 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SULT2B1O00204 365 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 MPPED1O15442 326 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 ALX3O95076 343 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SPARCP09486 303 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 GDF1P27539 372 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RAB11AP62491 216 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SGCAQ16586 387 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 WDR82Q6UXN9 313 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SSX7Q7RTT5 188 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 LGALS14Q8TCE9 139 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 CHRDL1Q9BU40 450 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RNF126Q9BV68 326 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF286AQ9HBT8 521 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 C7orf66A4D0T2 115 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 F6UZH7 168 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 TRAPPC2LH3BP13 241 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 MRPL33O75394 65 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 TUSC2O75896 110 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 PSMA6P60900 246 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 UBE2MP61081 183 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 KLF17Q5JT82 389 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SPATA46Q5T0L3 261 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 CD163Q86VB7 1156 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 OR56B1Q8NGI3 324 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 OR52B4Q8NGK2 314 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RTL8AQ9BWD3 113 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 OR2J1Q9GZK6 312 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 PLEKHJ1Q9NW61 149 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 PLEK2Q9NYT0 353 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 LY6LH3BQJ8 138 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 M0QZ24 198 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 HBE1P02100 147 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 GNRHRP30968 328 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 KIR2DS2P43631 304 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 MFAP2P55001 183 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RPL30P62888 115 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 EGR3Q06889 387 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RPL22L1Q6P5R6 122 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 FBXW12Q6X9E4 464 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SGPP2Q8IWX5 399 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 UHRF2Q96PU4 802 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 INTS14Q96SY0 518 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 MMP28Q9H239 520 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 NUBP2Q9Y5Y2 271 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 R4GMQ9 66 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 ERVH48-1M5A8F1 160 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 DHHO43323 396 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 TGOLN2O43493 480 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SYT7O43581 403 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 AKR1C4P17516 323 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 RCC1P18754 421 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 CHATP28329 748 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SRSF4Q08170 494 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 C6orf183Q5T699 404 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 C19orf35Q6ZS72 473 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 Q8IYB0 196 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 C12orf45Q8N5I9 185 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SPOCK3Q9BQ16 436 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 SF3B5Q9BWJ5 86 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 PLEKHA3Q9HB20 300 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 GPR84Q9NQS5 396 aa4.63□□□□□ -1.67
TOPBP1-201ENST00000260810 XRCC2O43543 280 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 NXPH3O95157 252 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 MBP02144 154 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 EGR2P11161 476 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TBPP20226 339 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 SERPINF1P36955 418 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 CCR6P51684 374 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ZNF404Q494X3 552 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 NRN1LQ496H8 165 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 PXDC1Q5TGL8 231 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 FCRLAQ7L513 359 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OR52I2Q8NH67 350 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TERB2Q8NHR7 220 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 SLC6A7Q99884 636 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 PAPOLGQ9BWT3 736 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 SNTG1Q9NSN8 517 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 TMEM100Q9NV29 134 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 DNAJB11Q9UBS4 358 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 FZR1Q9UM11 496 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 HHLA2Q9UM44 414 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 AMMECR1Q9Y4X0 333 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 OR5H14A6NHG9 310 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 MSGN1A6NI15 193 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 C9JQL5 133 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 HNF1AP20823 631 aa4.62□□□□□ -1.67
TOPBP1-201ENST00000260810 ARL3P36405 182 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms