RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PSG7Q13046 419 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 RTP5Q14D33 572 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
NEK3-205ENST00000610828 STOML3Q8TAV4 291 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 MRPL30Q8TCC3 161 aaKnown RBP11.6□□□□□ -0.55
NEK3-205ENST00000610828 ZC4H2Q9NQZ6 224 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 CYTL1Q9NRR1 136 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 TUBD1Q9UJT1 453 aa11.6□□□□□ -0.55
NEK3-205ENST00000610828 LSM5Q9Y4Y9 91 aaKnown RBP11.6□□□□□ -0.55
NEK3-205ENST00000610828 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 LRP5LA4QPB2 252 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 AHRRA9YTQ3 701 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 CDIPTO14735 213 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 DEGS1O15121 323 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 IGKV3-15P01624 115 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 CBR1P16152 277 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 GNRHRP30968 328 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 FAM76BQ5HYJ3 339 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 MEX3BQ6ZN04 569 aaKnown RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 BAP18Q8IXM2 172 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 LGI3Q8N145 548 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 ZNF565Q8N9K5 539 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 KLF14Q8TD94 323 aaPredicted RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 MSI2Q96DH6 328 aaKnown RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 LINC00052Q96N35 136 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 TP53RKQ96S44 253 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 SHARPINQ9H0F6 387 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 RIMS4Q9H426 269 aaPredicted RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 DNAJB11Q9UBS4 358 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 AKAP13Q12802 2813 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 LGALS8O00214 317 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 TM4SF5O14894 197 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 MPPED1O15442 326 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 WDR1O75083 606 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 MPV17P39210 176 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 ZNF154Q13106 437 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 OPN3Q9H1Y3 402 aaPredicted RBP11.59□□□□□ -0.55
NEK3-205ENST00000610828 OR2S2Q9NQN1 319 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 PLSCR4Q9NRQ2 329 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 NUP50Q9UKX7 468 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
NEK3-205ENST00000610828 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
NEK3-205ENST00000610828 IGKV1-6A0A0C4DH72 117 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 IQCF6A8MYZ5 107 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 DEDDO75618 318 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 GRPP07492 148 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 FGF2P09038 288 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 SELEP16581 610 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 RCC1P18754 421 aaPredicted RBP11.58□□□□□ -0.56
NEK3-205ENST00000610828 NAAAQ02083 359 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 OR8G1Q15617 311 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 ZNF610Q8N9Z0 462 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 GALNT11Q8NCW6 608 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 BVESQ8NE79 360 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
NEK3-205ENST00000610828 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
NEK3-205ENST00000610828 C18orf12Q96KH6 178 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 SLC5A7Q9GZV3 580 aa11.58□□□□□ -0.56
NEK3-205ENST00000610828 FBXO9Q9UK97 447 aaPredicted RBP11.58□□□□□ -0.56
NEK3-205ENST00000610828 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 A8MXK9 166 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 H0YL77 283 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 K7EPK0 472 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 TNFSF13O75888 250 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 HKR1P10072 659 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 ZP3P21754 424 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 NBL1P41271 181 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 HSD17B13Q7Z5P4 300 aaPredicted RBP11.57□□□□□ -0.56
NEK3-205ENST00000610828 Q8IYB0 196 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 FAM71E2Q8N5Q1 922 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 BARX1Q9HBU1 254 aaPredicted RBP11.57□□□□□ -0.56
NEK3-205ENST00000610828 OBP2BQ9NPH6 170 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 SIRPB1O00241 398 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 KLK10O43240 276 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 NXPH2O95156 264 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
NEK3-205ENST00000610828 Q6P435 159 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 IGFL3Q6UXB1 125 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 TBC1D26Q86UD7 250 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 FAM185AQ8N0U4 392 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 GAPTQ8N292 157 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 TMED6Q8WW62 240 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 STARD4Q96DR4 205 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 GPHA2Q96T91 129 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 PRRX2Q99811 253 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms