RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 KCTD7Q96MP8 289 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 GFI1Q99684 422 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 CST11Q9H112 138 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OR51E2Q9H255 320 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 EXOSC4Q9NPD3 245 aaKnown RBP8.18□□□□□ -1.1
GGA3-209ENST00000580646 MMP26Q9NRE1 261 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 SLC25A10Q9UBX3 287 aaPredicted RBP8.18□□□□□ -1.1
GGA3-209ENST00000580646 FBLN5Q9UBX5 448 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OR14J1Q9UGF5 321 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 OPN4Q9UHM6 478 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 ING4Q9UNL4 249 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 INSIG2Q9Y5U4 225 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 V9GY05 133 aa8.18□□□□□ -1.1
GGA3-209ENST00000580646 IGHV2-70DA0A0C4DH43 119 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 KIR2DS1A0A191URI9 304 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 ENSAO43768 121 aaKnown RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 AIREO43918 545 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 CDRT1O95170 752 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 HTR3BO95264 441 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 BPNT1O95861 308 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 TK1P04183 234 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 CSN2P05814 226 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 ERP29P30040 261 aaKnown RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 KCNJ3P48549 501 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 RBM11P57052 281 aaKnown RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 PAX5Q02548 391 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 COL10A1Q03692 680 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 Q6P435 159 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 BTNL3Q6UXE8 466 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 OR2W3Q7Z3T1 314 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 OR8H2Q8N162 312 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 ZNRF1Q8ND25 227 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 SLC25A28Q96A46 364 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 DCTN5Q9BTE1 182 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 DCUN1D5Q9BTE7 237 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 ELL3Q9HB65 397 aaPredicted RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 IL36RNQ9UBH0 155 aa8.17□□□□□ -1.1
GGA3-209ENST00000580646 RPUSD1Q9UJJ7 312 aaKnown RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 AK6Q9Y3D8 172 aaKnown RBP8.17□□□□□ -1.1
GGA3-209ENST00000580646 ANK2Q01484 3957 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 A0A1B0GW55 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 IFITM5A6NNB3 132 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 TMEM14DPA8MWL7 114 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 C22orf46C9J442 243 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 AIPO00170 330 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 MGST3O14880 152 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 OR2H2O95918 312 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 PAHP00439 452 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 FSHBP01225 129 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 SERPINA2P20848 420 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 SCAND1P57086 179 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 PAX8Q06710 450 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 IKZF1Q13422 519 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 CDK10Q15131 360 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 RAB11BQ15907 218 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 KIAA2026Q5HYC2 2103 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
GGA3-209ENST00000580646 C17orf107Q6ZR85 190 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 BTN2A1Q7KYR7 527 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 BATF2Q8N1L9 274 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 KIR3DL3Q8N743 410 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 TMEM185AQ8NFB2 350 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 KCNG3Q8TAE7 436 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 NUDT16L1Q9BRJ7 211 aaKnown RBP8.16□□□□□ -1.1
GGA3-209ENST00000580646 FUNDC2Q9BWH2 189 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 NCOR1P1Q9H4R4 102 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 STEAP1Q9UHE8 339 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 ZNF221Q9UK13 617 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 ST3GAL6Q9Y274 331 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 AUP1Q9Y679 476 aa8.16□□□□□ -1.1
GGA3-209ENST00000580646 A0A0G2JK05 382 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 LOC100506127A0A0U1RQW1 187 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 A0A1W2PPH5 198 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 SLC33A1O00400 549 aaPredicted RBP8.15□□□□□ -1.1
GGA3-209ENST00000580646 DEGS1O15121 323 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 PSPNO60542 156 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 GABARAPO95166 117 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 GLAP06280 429 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 VSIG8P0DPA2 414 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 SELLP14151 372 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 ZNF44P15621 663 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 ARSBP15848 533 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 MGMTP16455 207 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 FPR2P25090 351 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 OR3A1P47881 315 aa8.15□□□□□ -1.1
GGA3-209ENST00000580646 CEBPDP49716 269 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms