RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CD2P06729 351 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 NFYBP25208 207 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 MNDAP41218 407 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 RBM39Q14498 530 aaKnown RBP11.33□□□□□ -0.6
SNX6-210ENST00000557341 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 ZSCAN26Q16670 478 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 ABCA11PQ4W5N1 156 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 KLHL22Q53GT1 634 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 PQLC1Q8N2U9 271 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 OR5AU1Q8NGC0 362 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 TNFAIP8L1Q8WVP5 186 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 RBM14Q96PK6 669 aaKnown RBP11.33□□□□□ -0.6
SNX6-210ENST00000557341 SLC29A1Q99808 456 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 S100A14Q9HCY8 104 aa11.33□□□□□ -0.6
SNX6-210ENST00000557341 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
SNX6-210ENST00000557341 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 OR3A4PP47883 348 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 RSU1Q15404 277 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 ZNF529Q6P280 563 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 SATL1Q86VE3 508 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 ZNF565Q8N9K5 539 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 OR51A2Q8NGJ7 313 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 CNIH3Q8TBE1 160 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 GPR148Q8TDV2 347 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 RGP1Q92546 391 aaPredicted RBP11.32□□□□□ -0.6
SNX6-210ENST00000557341 TOMM40LQ969M1 308 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 NR1H4Q96RI1 486 aaPredicted RBP11.32□□□□□ -0.6
SNX6-210ENST00000557341 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 PCDHB16Q9NRJ7 776 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 TAS2R4Q9NYW5 299 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 CALYQ9NYX4 217 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 KIF25Q9UIL4 384 aa11.32□□□□□ -0.6
SNX6-210ENST00000557341 TRAV24A0A0B4J272 114 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 LY6LH3BQJ8 138 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 M0QZK8 103 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 IL1AP01583 271 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 PRB2P02812 416 aaPredicted RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 LPLP06858 475 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 PF4V1P10720 104 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 C21orf33P30042 268 aaPredicted RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 SOX2P48431 317 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 KCNJ3P48549 501 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 GTF2A1P52655 376 aaPredicted RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 CD83Q01151 205 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 PAX5Q02548 391 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 PIGYQ3MUY2 71 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 CCDC58Q4VC31 144 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 CENPVQ7Z7K6 275 aaPredicted RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 OR13A1Q8NGR1 328 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 RPEQ96AT9 228 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 RDH12Q96NR8 316 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 NCOR1P1Q9H4R4 102 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 FGF20Q9NP95 211 aaPredicted RBP11.31□□□□□ -0.6
SNX6-210ENST00000557341 DNAH3Q8TD57 4116 aa11.31□□□□□ -0.6
SNX6-210ENST00000557341 PIN1P1O15428 100 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 CD33P20138 364 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 PPP3R1P63098 170 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 RSBN1Q5VWQ0 802 aaPredicted RBP11.3□□□□□ -0.6
SNX6-210ENST00000557341 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 TMPRSS11AQ6ZMR5 421 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 OR10K1Q8NGX5 313 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 SGCDQ92629 289 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 SMPD3Q9NY59 655 aaPredicted RBP11.3□□□□□ -0.6
SNX6-210ENST00000557341 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 TSSC4Q9Y5U2 329 aaPredicted RBP11.3□□□□□ -0.6
SNX6-210ENST00000557341 HSPE1-MOB4S4R3N1 261 aa11.3□□□□□ -0.6
SNX6-210ENST00000557341 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 J3QR06 171 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
SNX6-210ENST00000557341 HTR3BO95264 441 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 PF4P02776 101 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 AMY1AP04745 511 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 AMY2AP04746 511 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 CGB3P0DN86 165 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 CGB7P0DN87 165 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 DCKP27707 260 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 SSTR5P35346 364 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 ETV1P50549 477 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 MADCAM1Q13477 382 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms