RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
CHMP1A-206ENST00000549139 hADV38S2A0JD32 116 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 C17orf98A8MV24 154 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 GTF2F2P13984 249 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 CCL3L1P16619 93 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 SERPINA2P20848 420 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 GABRA5P31644 462 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 UBE2E1P51965 193 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 DLX6P56179 175 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 EDDM3AQ14507 147 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 UBE2UQ5VVX9 321 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 GLT8D1Q68CQ7 371 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 GLIPR1L1Q6UWM5 242 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 LRRTM1Q86UE6 522 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 ST3GAL6Q9Y274 331 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 LINC00312Q9Y6C7 94 aa12.82□□□□□ -0.36
CHMP1A-206ENST00000549139 ARL6IP5O75915 188 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 TSPAN15O95858 294 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 RBP4P02753 201 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 ZNF728P0DKX0 622 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 DLX1P56177 255 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 RBM11P57052 281 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 SSX1Q16384 188 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 PIGYQ3MUY2 71 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 SLC22A6Q4U2R8 563 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 AWAT2Q6E213 333 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 Q6YL49 198 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 OR4D6Q8NGJ1 314 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 FCGR1BQ92637 280 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 CORO2AQ92828 525 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 MRPS24Q96EL2 167 aaKnown RBP12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 PPA2Q9H2U2 334 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 IFT22Q9H7X7 185 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 HEXA-AS1Q9H8Q6 139 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 GHRLQ9UBU3 117 aa12.81□□□□□ -0.36
CHMP1A-206ENST00000549139 TRAV24A0A0B4J272 114 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 CLPXO76031 633 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 CRYBA1P05813 215 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 KCNJ3P48549 501 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 P2RX3P56373 397 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 ERVFRD-1P60508 538 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 FABP5Q01469 135 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 AESQ08117 197 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 KLRD1Q13241 179 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 TAF9Q16594 264 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 MPV17LQ2QL34 196 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 HCP5Q6MZN7 132 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 ZNF773Q6PK81 442 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 TCF23Q7RTU1 214 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 PDZD9Q8IXQ8 264 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 NCOR1P1Q9H4R4 102 aa12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
CHMP1A-206ENST00000549139 TENM3Q9P273 2699 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 A0A1W2PP11 408 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 CCRL2O00421 344 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 NPFFO15130 113 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 GALP22466 123 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 GLIPR1P48060 266 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 PROK1P58294 105 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 PAX5Q02548 391 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 KCTD21Q4G0X4 260 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 PAN3Q58A45 887 aaKnown RBP12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 KRBOX4Q5JUW0 171 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 CD200R1LQ6Q8B3 271 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 TMEM86BQ8N661 226 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 COQ2Q96H96 371 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 TNFRSF19Q9NS68 423 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 NDUFB11Q9NX14 153 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 PLXNB1O43157 2135 aa12.79□□□□□ -0.36
CHMP1A-206ENST00000549139 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 GEMIN2O14893 280 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 UBBP0CG47 229 aa12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 RNF114Q9Y508 228 aa12.78□□□□□ -0.36
CHMP1A-206ENST00000549139 TRGV10A0A0A0MS01 117 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 A0A0U1RQK1 487 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 ODAMA1E959 279 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 MEX3AA1L020 520 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A10PA6NDY2 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A18PA6NE21 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A16PA6NEW6 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A20PA6NIJ5 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A8PA6NJQ4 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A7PA6NKC0 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A22PA8MWA6 464 aa12.77□□□□□ -0.37
CHMP1A-206ENST00000549139 FAM90A12PA8MX19 464 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms